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Sequencing techniques

Differential gene expression profile of multinodular goiter

Wenberger Lanza Daniel de Figueiredo, Eraldo Ferreira Lopes, Deborah Laredo Jezini, Lorena Naciff Marçal, Enedina Nogueira de Assunção, Paulo Rodrigo Ribeiro Rodrigues, Adolfo José da Mota, Diego Monteiro de Carvalho, Spartaco Astolfi Filho, João Bosco Lopes Botelho

published 20 May 2022

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MAECI: A pipeline for generating consensus sequence with nanopore sequencing long-read assembly and error correction

Jidong Lang

published 20 May 2022

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A model for isoform-level differential expression analysis using RNA-seq data without pre-specifying isoform structure

Yang Liu, Junying Wang, Song Wu, Jie Yang

published 16 May 2022

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Transcriptomes of testis and pituitary from male Nile tilapia (O. niloticus L.) in the context of social status

Michelle Thönnes, Rebecca Prause, Berta Levavi-Sivan, Frank Pfennig

published 11 May 2022

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Metabolic and transcriptome analysis of dark red taproot in radish (Raphanus sativus L.)

Shuangping Heng, Changbin Gao, Mengdi Cui, Jing Fu, Sujing Ren, Kaiyun Xin, Congan He, Aihua Wang, Liping Song, Liguang Tang, Bincai Wang, Xueli Zhang

published 10 May 2022

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Direct assessment of possible mutations in the 23S rRNA gene encoding macrolide resistance in Chlamydia trachomatis

J. M. van Niekerk, I. H. M. van Loo, M. Lucchesi, S. A. Morré, C. J. P. A. Hoebe, N. H. T. M. Dukers-Muijrers, P. F. G. Wolffs

published 10 May 2022

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A sheet pocket to prevent cross-contamination of formalin-fixed paraffin-embedded block for application in next generation sequencing

Keiichi Iwaya, Hisae Arai, Nanao Takatou, Yuka Morita, Rinko Ozeki, Hirofumi Nakaoka, Masaru Sakamoto, Tsutomu Kouno, Masayoshi Soma

published 04 May 2022

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Whole genome sequencing of SARS-CoV2 strains circulating in Iran during five waves of pandemic

Jila Yavarian, Ahmad Nejati, Vahid Salimi, Nazanin Zahra Shafiei Jandaghi, Kaveh Sadeghi, Adel Abedi, Ali Sharifi Zarchi, Mohammad Mehdi Gouya, Talat Mokhtari-Azad

published 02 May 2022

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Assessment of RNA extraction protocols from cladocerans

Muhammad Raznisyafiq Razak, Ahmad Zaharin Aris, Fatimah Md Yusoff, Zetty Norhana Balia Yusof, Sang Don Kim, Kyoung Woong Kim

published 26 Apr 2022

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A real-time PCR method to genotype mutant mouse models with altered affinity for cardiotonic steroids on the Na,K-ATPase

Peter W. Chomczynski, Kianna M. Vires, Michal Rymaszewski, Judith A. Heiny

published 21 Apr 2022

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Development and evaluation of ActSeq: A targeted next-generation sequencing panel for clinical oncology use

Zonggao Shi, Jacqueline Lopez, William Kalliney, Bobbie Sutton, Joyce Simpson, Kevin Maggert, Sheng Liu, Jun Wan, M. Sharon Stack

published 21 Apr 2022

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Effects of autophagy modulators tamoxifen and chloroquine on the expression profiles of long non-coding RNAs in MIAMI cells exposed to IFNγ

Rajkaran Banga, Veerkaran Banga, Amr Eltalla, Lauren Shahin, Sonam Parag, Maha Naim, Easha Iyer, Neha Kumrah, Brian Zacharias, Lubov Nathanson, Vladimir Beljanski

published 21 Apr 2022

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idpr: A package for profiling and analyzing Intrinsically Disordered Proteins in R

William M. McFadden, Judith L. Yanowitz

published 18 Apr 2022

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