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Sequencing techniques

Competition between Phytophthora infestans Effectors Leads to Increased Aggressiveness on Plants Containing Broad-Spectrum Late Blight Resistance

Dennis A. Halterman, Yu Chen, Jiraphan Sopee, Julio Berduo-Sandoval, Amilcar Sánchez-Pérez

published 07 May 2010

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Cost-Effective Sequencing of Full-Length cDNA Clones Powered by a De Novo-Reference Hybrid Assembly

Reginaldo M. Kuroshu, Junichi Watanabe,, Sumio Sugano, Shinichi Morishita, Yutaka Suzuki, Masahiro Kasahara

published 07 May 2010

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Computational Protein Design: Validation and Possible Relevance as a Tool for Homology Searching and Fold Recognition

Marcel Schmidt am Busch, Audrey Sedano, Thomas Simonson

published 05 May 2010

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Sensitivity of Noninvasive Prenatal Detection of Fetal Aneuploidy from Maternal Plasma Using Shotgun Sequencing Is Limited Only by Counting Statistics

H. Christina Fan, Stephen R. Quake

published 03 May 2010

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Structural Allele-Specific Patterns Adopted by Epitopes in the MHC-I Cleft and Reconstruction of MHC:peptide Complexes to Cross-Reactivity Assessment

Dinler A. Antunes, Gustavo F. Vieira, Maurício M. Rigo, Samuel P. Cibulski, Marialva Sinigaglia, José A. B. Chies

published 26 Apr 2010

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Initial Fitness Recovery of HIV-1 Is Associated with Quasispecies Heterogeneity and Can Occur without Modifications in the Consensus Sequence

Antonio V. Bordería, Ramon Lorenzo-Redondo, Maria Pernas, Concepción Casado, Tamara Alvaro, Esteban Domingo, Cecilio Lopez-Galindez

published 26 Apr 2010

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Characterization of Quasispecies of Pandemic 2009 Influenza A Virus (A/H1N1/2009) by De Novo Sequencing Using a Next-Generation DNA Sequencer

Makoto Kuroda, Harutaka Katano, Noriko Nakajima, Minoru Tobiume, Akira Ainai, Tsuyoshi Sekizuka, Hideki Hasegawa, Masato Tashiro, Yuko Sasaki, Yoshichika Arakawa, Satoru Hata, Masahide Watanabe, Tetsutaro Sata

published 23 Apr 2010

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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community

Jenna L. Morgan, Aaron E. Darling, Jonathan A. Eisen

published 16 Apr 2010

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Characterization of a Heme-Regulated Non-Coding RNA Encoded by the prrF Locus of Pseudomonas aeruginosa

Amanda G. Oglesby-Sherrouse, Michael L. Vasil

published 08 Apr 2010

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Pepper Mild Mottle Virus, a Plant Virus Associated with Specific Immune Responses, Fever, Abdominal Pains, and Pruritus in Humans

Philippe Colson, Hervé Richet, Christelle Desnues, Fanny Balique, Valérie Moal, Jean-Jacques Grob, Philippe Berbis, Hervé Lecoq, Jean-Robert Harlé, Yvon Berland, Didier Raoult

published 06 Apr 2010

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Increased Throughput by Parallelization of Library Preparation for Massive Sequencing

Sverker Lundin, Henrik Stranneheim, Erik Pettersson, Daniel Klevebring, Joakim Lundeberg

published 06 Apr 2010

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Deep Sequencing of Target Linkage Assay-Identified Regions in Familial Breast Cancer: Methods, Analysis Pipeline and Troubleshooting

Juan Manuel Rosa-Rosa, Francisco Javier Gracia-Aznárez, Emily Hodges, Guillermo Pita, Michelle Rooks, Zhenyu Xuan, Arindam Bhattacharjee, Leonardo Brizuela, José M. Silva, Gregory J. Hannon, Javier Benitez

published 02 Apr 2010

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A New Method for Predicting the Subcellular Localization of Eukaryotic Proteins with Both Single and Multiple Sites: Euk-mPLoc 2.0

Kuo-Chen Chou, Hong-Bin Shen

published 01 Apr 2010

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