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Sequencing techniques

Investigation of evolutionary dynamics for drug resistance in 3D spheroid model system using cellular barcoding technology

Gizem Damla Yalcin, Kubra Celikbas Yilmaz, Tugce Dilber, Ahmet Acar

published 26 Sep 2023

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The effects of different biochars on Caenorhabditis elegans and the underlying transcriptomic mechanisms

Yixuan Chen, Xinrui Wang, Jie Li, Zhiwen Wang, Tingting Song, Xin Lai, Guilong Zhang, Weibin Ruan

published 22 Sep 2023

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Understanding painful versus non-painful dental pain in female and male patients: A transcriptomic analysis of human biopsies

Biraj Patel, Michael A. Eskander, Phoebe Fang-Mei Chang, Brett Chapa, Shivani B. Ruparel, Zhao Lai, Yidong Chen, Armen Akopian, Nikita B. Ruparel

published 21 Sep 2023

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Expansion microscopy using a single anchor molecule for high-yield multiplexed imaging of proteins and RNAs

Yi Cui, Gaojie Yang, Daniel R. Goodwin, Ciara H. O’Flanagan, Anubhav Sinha, Chi Zhang, Kristina E. Kitko, Tay Won Shin, Demian Park, Samuel Aparicio, CRUK IMAXT Grand Challenge Consortium , Edward S. Boyden

published 20 Sep 2023

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Shotgun metagenomics captures more microbial diversity than targeted 16S rRNA gene sequencing for field specimens and preserved museum specimens

Joseph D. Madison, Brandon C. LaBumbard, Douglas C. Woodhams

published 19 Sep 2023

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Prediction of hot spots towards drug discovery by protein sequence embedding with 1D convolutional neural network

Youzhi Zhang, Sijie Yao, Peng Chen

published 18 Sep 2023

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Cloning, expression, and molecular modification of glycoside hydrolase family 5 genes from Thermoascus aurantiacus

Hongwei Shao

published 15 Sep 2023

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Performance and microbial community analysis on nitrate removal in a bioelectrochemical reactor

Han Li, Ying Cui, Fei Wang, Jinghua Li, Dafu Wu, Jing Fan

published 14 Sep 2023

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A simple, single-tube overlapping amplicon-targeted Illumina sequencing assay

Jason D. Limberis, Alina Nalyvayko, Joel D. Ernst, John Z. Metcalfe

published 14 Sep 2023

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Gene regulation analysis of patient-derived iPSCs and its CRISPR-corrected control provides a new tool for studying perturbations of ELMOD3 c.512A>G mutation during the development of inherited hearing loss

Xianlin Liu, Jie Wen, Xuezhong Liu, Anhai Chen, Sijun Li, Jing Liu, Jie Sun, Wei Gong, Xiaoming Kang, Zhili Feng, Chufeng He, Lingyun Mei, Jie Ling, Yong Feng

published 14 Sep 2023

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Quantification by droplet digital PCR and species identification by metabarcoding of environmental (e)DNA from Blainville’s beaked whales, with assisted localization from an acoustic array

Charles Scott Baker, Diane Claridge, Charlotte Dunn, Thomas Fetherston, Dorothy Nevé Baker, Holger Klinck, Debbie Steel

published 13 Sep 2023

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Complete genome assembly of Hawai’i environmental nontuberculous mycobacteria reveals unexpected co-isolation with methylobacteria

Jo Hendrix, L. Elaine Epperson, Eric I. Tong, Yvonne L. Chan, Nabeeh A. Hasan, Stephanie N. Dawrs, Grant J. Norton, Ravleen Virdi, James L. Crooks, Edward D. Chan, Jennifer R. Honda, Michael Strong

published 13 Sep 2023

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Updated knowledge and a proposed nomenclature for nuclear receptors with two DNA binding domains (2DBD-NRs)

Wenjie Wu, Philip T. LoVerde

published 12 Sep 2023

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