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Sequencing techniques

Predictive Efficacy of Low Burden EGFR Mutation Detected by Next-Generation Sequencing on Response to EGFR Tyrosine Kinase Inhibitors in Non-Small-Cell Lung Carcinoma

Hye Sook Kim, Jae Sook Sung, Song-Ju Yang, Nak-Jung Kwon, LiHua Jin, Seung Tae Kim, Kyong Hwa Park, Sang Won Shin, Han Kyeom Kim, Jin-Hyoung Kang, Jeong-Oh Kim, Jae Yong Park, Jin Eun Choi, HyoungKyu Yoon, Chan Kwon Park, Kap-Seok Yang, Jeong-Sun Seo, Yeul Hong Kim

published 20 Dec 2013

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Inferring Short-Range Linkage Information from Sequencing Chromatograms

Bastian Beggel, Maria Neumann-Fraune, Rolf Kaiser, Jens Verheyen, Thomas Lengauer

published 20 Dec 2013

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Generalized Baum-Welch Algorithm Based on the Similarity between Sequences

Vahid Rezaei, Hamid Pezeshk, Horacio Pérez-Sa'nchez

published 20 Dec 2013

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Genome-Wide Analyses of Radioresistance-Associated miRNA Expression Profile in Nasopharyngeal Carcinoma Using Next Generation Deep Sequencing

Guo Li, Yuanzheng Qiu, Zhongwu Su, Shuling Ren, Chao Liu, Yongquan Tian, Yong Liu

published 19 Dec 2013

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Effect on HIV-1 Gene Expression, Tat-Vpr Interaction and Cell Apoptosis by Natural Variants of HIV-1 Tat Exon 1 and Vpr from Northern India

Sneh Lata, Larance Ronsard, Vikas Sood, Sajad A. Dar, Vishnampettai G. Ramachandran, Shukla Das, Akhil C. Banerjea

published 19 Dec 2013

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Isolation and Characterization of Two Novel Bacteria Afipia cberi and Mesorhizobium hominis from Blood of a Patient Afflicted with Fatal Pulmonary Illness

Shyh-Ching Lo, Bingjie Li, Guo-Chiuan Hung, Haiyan Lei, Tianwei Li, Jing Zhang, Kenjiro Nagamine, Shien Tsai, Mark J. Zucker, Ludmilla Olesnicky

published 18 Dec 2013

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Complete Mitochondrial Genomes of Chimpanzee- and Gibbon-Derived Ascaris Isolated from a Zoological Garden in Southwest China

Yue Xie, Lili Niu, Bo Zhao, Qiang Wang, Xiang Nong, Lin Chen, Xuan Zhou, Xiaobin Gu, Shuxian Wang, Xuerong Peng, Guangyou Yang

published 17 Dec 2013

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The V Protein of Canine Distemper Virus Is Required for Virus Replication in Human Epithelial Cells

Noriyuki Otsuki, Yuichiro Nakatsu, Toru Kubota, Tsuyoshi Sekizuka, Fumio Seki, Kouji Sakai, Makoto Kuroda, Ryoji Yamaguchi, Makoto Takeda

published 17 Dec 2013

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The Utility of Shallow RNA-Seq for Documenting Differential Gene Expression in Genes with High and Low Levels of Expression

Joel Atallah, David C. Plachetzki, W. Cameron Jasper, Brian R. Johnson

published 16 Dec 2013

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A Universal Method for Species Identification of Mammals Utilizing Next Generation Sequencing for the Analysis of DNA Mixtures

Andreas O. Tillmar, Barbara Dell'Amico, Jenny Welander, Gunilla Holmlund

published 16 Dec 2013

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SoftSearch: Integration of Multiple Sequence Features to Identify Breakpoints of Structural Variations

Steven N. Hart, Vivekananda Sarangi, Raymond Moore, Saurabh Baheti, Jaysheel D. Bhavsar, Fergus J. Couch, Jean-Pierre A. Kocher

published 16 Dec 2013

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MicroRNA Profiling of Primary Cutaneous Large B-Cell Lymphomas

Lianne Koens, Yongjun Qin, Wai Y. Leung, Willem E. Corver, Patty M. Jansen, Rein Willemze, Maarten H. Vermeer, Cornelis P. Tensen

published 16 Dec 2013

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Ion Torrent PGM as Tool for Fungal Community Analysis: A Case Study of Endophytes in Eucalyptus grandis Reveals High Taxonomic Diversity

Martin Kemler, Jeff Garnas, Michael J. Wingfield, Marieka Gryzenhout, Kerry-Anne Pillay, Bernard Slippers

published 16 Dec 2013

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