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Sequencing techniques

Efficient Genotyping of KRAS Mutant Non-Small Cell Lung Cancer Using a Multiplexed Droplet Digital PCR Approach

Alexandra Pender, Isaac Garcia-Murillas, Sareena Rana, Rosalind J. Cutts, Gavin Kelly, Kerry Fenwick, Iwanka Kozarewa, David Gonzalez de Castro, Jaishree Bhosle, Mary O’Brien, Nicholas C. Turner, Sanjay Popat, Julian Downward

published 28 Sep 2015

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HIV-1 Tropism Determines Different Mutation Profiles in Proviral DNA

Sieberth Nascimento-Brito, Jean Paulo Zukurov, Juliana T. Maricato, Angela C. Volpini, Anna Christina M. Salim, Flávio M. G. Araújo, Roney S. Coimbra, Guilherme C. Oliveira, Fernando Antoneli, Luiz Mário R. Janini

published 28 Sep 2015

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The Complete Genome Phylogeny of Geographically Distinct Dengue Virus Serotype 2 Isolates (1944-2013) Supports Further Groupings within the Cosmopolitan Genotype

Akhtar Ali, Ijaz Ali

published 28 Sep 2015

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Differential microRNA Analysis of Glandular Trichomes and Young Leaves in Xanthium strumarium L. Reveals Their Putative Roles in Regulating Terpenoid Biosynthesis

Rongyan Fan, Yuanjun Li, Changfu Li, Yansheng Zhang

published 25 Sep 2015

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Deep Sequencing for Evaluation of Genetic Stability of Influenza A/California/07/2009 (H1N1) Vaccine Viruses

Laassri Majid, Tatiana Zagorodnyaya, Ewan P. Plant, Svetlana Petrovskaya, Bella Bidzhieva, Zhiping Ye, Vahan Simonyan, Konstantin Chumakov

published 25 Sep 2015

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msCentipede: Modeling Heterogeneity across Genomic Sites and Replicates Improves Accuracy in the Inference of Transcription Factor Binding

Anil Raj, Heejung Shim, Yoav Gilad, Jonathan K. Pritchard, Matthew Stephens

published 25 Sep 2015

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Genotypic Characterization of Herpes Simplex Virus Type 1 Isolates in Immunocompromised Patients in Rio de Janeiro, Brazil

Amanda Perse da Silva, Amanda de Oliveira Lopes, Yasmine Rangel Vieira, Adilson José de Almeida, Fernando Samuel Sion, Beatriz Grinsztejn, Sandra Wagner, Vanessa Salete de Paula

published 25 Sep 2015

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Different Stress-Induced Calcium Signatures Are Reported by Aequorin-Mediated Calcium Measurements in Living Cells of Aspergillus fumigatus

Alberto Muñoz, Margherita Bertuzzi, Jan Bettgenhaeuser, Nino Iakobachvili, Elaine M. Bignell, Nick D. Read

published 24 Sep 2015

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Pyvolve: A Flexible Python Module for Simulating Sequences along Phylogenies

Stephanie J. Spielman, Claus O. Wilke

published 23 Sep 2015

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Transcriptome Profiling of Pediatric Core Binding Factor AML

Chih-Hao Hsu, Cu Nguyen, Chunhua Yan, Rhonda E. Ries, Qing-Rong Chen, Ying Hu, Fabiana Ostronoff, Derek L. Stirewalt, George Komatsoulis, Shawn Levy, Daoud Meerzaman, Soheil Meshinchi

published 23 Sep 2015

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Identification of microRNAs in the Toxigenic Dinoflagellate Alexandrium catenella by High-Throughput Illumina Sequencing and Bioinformatic Analysis

Huili Geng, Zhenghong Sui, Shu Zhang, Qingwei Du, Yuanyuan Ren, Yuan Liu, Fanna Kong, Jie Zhong, Qingxia Ma

published 23 Sep 2015

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A ddRAD Based Linkage Map of the Cultivated Strawberry, Fragaria xananassa

Jahn Davik, Daniel James Sargent, May Bente Brurberg, Sigbjørn Lien, Matthew Kent, Muath Alsheikh

published 23 Sep 2015

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Differentiation of Campylobacter jejuni and Campylobacter coli Using Multiplex-PCR and High Resolution Melt Curve Analysis

Banya Banowary, Van Tuan Dang, Subir Sarker, Joanne H. Connolly, Jeremy Chenu, Peter Groves, Michelle Ayton, Shane Raidal, Aruna Devi, Thiru Vanniasinkam, Seyed A. Ghorashi

published 22 Sep 2015

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