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Sequencing techniques

Phenotypic and molecular characterization of the largest worldwide cluster of hereditary angioedema type 1

Juan Sebastian Arias-Flórez, Sandra Ximena Ramirez, Bibiana Bayona-Gomez, Lina Castro-Castillo, Valeria Correa-Martinez, Yasmín Sanchez-Gomez, William Usaquén-Martínez, Lilian Andrea Casas-Vargas, Carlos Eduardo Olmos Olmos, Nora Contreras Bravo, Camilo Andres Velandia-Piedrahita, Adrien Morel, Rodrigo Cabrera-Perez, Natalia Santiago-Tovar, Cristian Camilo Gaviria-Sabogal, Ingrid Tatyana Bernal, Dora Janeth Fonseca-Mendoza, Carlos M. Restrepo

published 26 Dec 2024

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Comparison of qPCR protocols for quantification of “Candidatus Saccharibacteria”, belonging to the Candidate Phyla Radiation, suggests that 23S rRNA is a better target than 16S rRNA

Stella Papaleo, Riccardo Nodari, Lodovico Sterzi, Enza D’Auria, Camilla Cattaneo, Giorgia Bettoni, Clara Bonaiti, Ella Pagliarini, Gianvincenzo Zuccotti, Simona Panelli, Francesco Comandatore

published 26 Dec 2024

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Molecular monitoring of short- and long-term transcriptional effects of hair growth stimulating agents

Sabrina K. Henne, Lara M. Hochfeld, Werner Bartmann, Thomas Welss, Markus M. Nöthen, Stefanie Heilmann-Heimbach

published 23 Dec 2024

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Transcriptomic analysis of male diamondback moth antennae: Response to female semiochemicals and allyl isothiocyanate

Yueqin Zheng, Qianxia Liu, Houjun Tian, Hui Wei

published 19 Dec 2024

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Comprehensive analysis of bioinformatics and system biology reveals the association between Girdin and hepatocellular carcinoma

Tengda Huang, Hongying Chen, Hongyuan Pan, Tian Wu, Xiangyi Ren, Liwen Qin, Kefei Yuan, Fang He

published 13 Dec 2024

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Comparative analysis of WC1.1⁺ and WC1.2⁺ γδ T cell subset responses from cattle naturally infected with Mycobacterium bovis to repeat stimulation with mycobacterial antigens

Alia Parveen, Sajad A. Bhat, Mahmoud Elnaggar, Kieran G. Meade

published 12 Dec 2024

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Assessment of salivary microRNA by RT-qPCR: Facing challenges in data interpretation for clinical diagnosis

Marc Van Der Hofstadt, Anna Cardinal, Morgane Lepeltier, Jérémy Boulestreau, Alimata Ouedraogo, Malik Kahli, Pierre Champigneux, Laurence Molina, Franck Molina, Thi Nhu Ngoc Van

published 10 Dec 2024

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Evaluation of VP4-VP2 sequencing for molecular typing of human enteroviruses

Kouichi Kitamura, Minetaro Arita

published 10 Dec 2024

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stilPCR increases the effective sequencing length of Illumina targeted next-generation sequencing

Jason D. Limberis, Roland J. Nagel, Soumitesh Chakravorty, Dena Block, Scott Dewell, Alina Nalyvayko, Zach Howard, Grant Theron, Rouxjeane Venter, John Z. Metcalfe

published 09 Dec 2024

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A percolation theory analysis of continuous functional paths in protein sequence space affirms previous insights on the optimization of proteins for adaptability

Brian J. Miller

published 05 Dec 2024

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MetaCONNET: A metagenomic polishing tool for long-read assemblies

Bingru Sun, Jian Guo, Hao Jin, Zijie Jin, Yaping Sun, Yuanchen Mao, Fuli Xie, Yun He, Zhihong Sun, Wei Li, Igor Ivanov, Hui Tian

published 03 Dec 2024

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Amplified DNA heterogeneity assessment with Oxford Nanopore sequencing applied to cell free expression templates

Sepehr Hejazi, Afrin Ahsan, SeyedMohammad Kashani, Denis Tameiv, Nigel F. Reuel

published 03 Dec 2024

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Rethreading the needle: A novel molecular index of soil health (MISH) using microbial functional genes to predict soil health management

Heather L. Deel, Daniel K. Manter, Jennifer M. Moore

published 02 Dec 2024

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