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Sequencing techniques

Longitudinal sampling of the lung microbiota in individuals with cystic fibrosis

Fiona J. Whelan, Alya A. Heirali, Laura Rossi, Harvey R. Rabin, Michael D. Parkins, Michael G. Surette

published 02 Mar 2017

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The impact of RNA secondary structure on read start locations on the Illumina sequencing platform

Adam Price, Jaishree Garhyan, Cynthia Gibas

published 28 Feb 2017

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High throughput deep degradome sequencing reveals microRNAs and their targets in response to drought stress in mulberry (Morus alba)

Ruixue Li, Dandan Chen, Taichu Wang, Yizhen Wan, Rongfang Li, Rongjun Fang, Yuting Wang, Fei Hu, Hong Zhou, Long Li, Weiguo Zhao

published 24 Feb 2017

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Phase-specific expression of an insulin-like androgenic gland factor in a marine shrimp Lysmata wurdemanni: Implication for maintaining protandric simultaneous hermaphroditism

Dong Zhang, Min Sun, Xin Liu

published 24 Feb 2017

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Biases in the SMART-DNA library preparation method associated with genomic poly dA/dT sequences

Oriya Vardi, Inbal Shamir, Elisheva Javasky, Alon Goren, Itamar Simon

published 24 Feb 2017

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Single nucleotide polymorphism discovery in bovine liver using RNA-seq technology

Chandra Shekhar Pareek, Paweł Błaszczyk, Piotr Dziuba, Urszula Czarnik, Leyland Fraser, Przemysław Sobiech, Mariusz Pierzchała, Yaping Feng, Haja N. Kadarmideen, Dibyendu Kumar

published 24 Feb 2017

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Can milk cell or skim milk miRNAs be used as biomarkers for early pregnancy detection in cattle?

Corina I. Schanzenbach, Benedikt Kirchner, Susanne E. Ulbrich, Michael W. Pfaffl

published 24 Feb 2017

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Bioinformatic prediction of G protein-coupled receptor encoding sequences from the transcriptome of the foreleg, including the Haller’s organ, of the cattle tick, Rhipicephalus australis

Sergio Munoz, Felix D. Guerrero, Anastasia Kellogg, Andrew M. Heekin, Ming-Ying Leung

published 23 Feb 2017

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Targeted sequencing identifies a novel SH2D1A pathogenic variant in a Chinese family: Carrier screening and prenatal genetic testing

Jun-Yu Zhang, Song-Chang Chen, Yi-Yao Chen, Shu-Yuan Li, Lan-Lan Zhang, Ying-Hua Shen, Chun-Xin Chang, Yu-Qian Xiang, He-Feng Huang, Chen-Ming Xu

published 23 Feb 2017

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The widely used Nicotiana benthamiana 16c line has an unusual T-DNA integration pattern including a transposon sequence

Joshua G. Philips, Fatima Naim, Michał T. Lorenc, Kevin J. Dudley, Roger P. Hellens, Peter M. Waterhouse

published 23 Feb 2017

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An outbreak of acute respiratory disease caused by a virus associated RNA II gene mutation strain of human adenovirus 7 in China, 2015

Xiaoxia Yang, Qiongshu Wang, Beibei Liang, Fuli Wu, Hao Li, Hongbo Liu, Chunyu Sheng, Qiuxia Ma, Chaojie Yang, Jing Xie, Peng Li, Leili Jia, Ligui Wang, Xinying Du, Shaofu Qiu, Hongbin Song

published 22 Feb 2017

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Combined small RNA and degradome sequencing reveals complex microRNA regulation of catechin biosynthesis in tea (Camellia sinensis)

Ping Sun, Chunzhen Cheng, Yuling Lin, Qiufang Zhu, Jinke Lin, Zhongxiong Lai

published 22 Feb 2017

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The distinct features of microbial ‘dysbiosis’ of Crohn’s disease do not occur to the same extent in their unaffected, genetically-linked kindred

Umer Zeeshan Ijaz, Christopher Quince, Laura Hanske, Nick Loman, Szymon T. Calus, Martin Bertz, Christine A. Edwards, Daniel R. Gaya, Richard Hansen, Paraic McGrogan, Richard K. Russell, Konstantinos Gerasimidis

published 21 Feb 2017

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