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Sequencing techniques

HIV-1 envelope sequence-based diversity measures for identifying recent infections

Alexis Kafando, Eric Fournier, Bouchra Serhir, Christine Martineau, Florence Doualla-Bell, Mohamed Ndongo Sangaré, Mohamed Sylla, Annie Chamberland, Mohamed El-Far, Hugues Charest, Cécile L. Tremblay

published 28 Dec 2017

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DNase-capture reveals differential transcription factor binding modalities

Daniel Kang, Richard Sherwood, Amira Barkal, Tatsunori Hashimoto, Logan Engstrom, David Gifford

published 28 Dec 2017

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Characteristics of percutaneous core biopsies adequate for next generation genomic sequencing

Sharjeel H. Sabir, Savitri Krishnamurthy, Sanjay Gupta, Gordon B. Mills, Wei Wei, Andrea C. Cortes, Kenna R. Mills Shaw, Rajyalakshmi Luthra, Michael J. Wallace

published 27 Dec 2017

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RNA-Seq differential expression analysis: An extended review and a software tool

Juliana Costa-Silva, Douglas Domingues, Fabricio Martins Lopes

published 21 Dec 2017

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Construction of an SNP-based high-density linkage map for flax (Linum usitatissimum L.) using specific length amplified fragment sequencing (SLAF-seq) technology

Liuxi Yi, Fengyun Gao, Bateer Siqin, Yu Zhou, Qiang Li, Xiaoqing Zhao, Xiaoyun Jia, Hui Zhang

published 21 Dec 2017

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Functional implications of hexameric assembly of RraA proteins from Vibrio vulnificus

Saemee Song, Seokho Hong, Jinyang Jang, Ji-Hyun Yeom, Nohra Park, Jaejin Lee, Yeri Lim, Jun-Yeong Jeon, Hyung-Kyoon Choi, Minho Lee, Nam-Chul Ha, Kangseok Lee

published 20 Dec 2017

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The gene encoding the insulin-like androgenic gland hormone in an all-female parthenogenetic crayfish

Tom Levy, Ohad Rosen, Ohad Simons, Amit Savaya Alkalay, Amir Sagi

published 20 Dec 2017

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Prevalence and molecular characterization of Giardia intestinalis in racehorses from the Sichuan province of southwestern China

Lei Deng, Wei Li, Zhijun Zhong, Xuehan Liu, Yijun Chai, Xue Luo, Yuan Song, Wuyou Wang, Chao Gong, Xiangming Huang, Yanchun Hu, Hualin Fu, Min He, Ya Wang, Yue Zhang, Kongju Wu, Suizhong Cao, Guangneng Peng

published 20 Dec 2017

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Targeted next-generation sequencing provides novel clues for associated epilepsy and cardiac conduction disorder/SUDEP

Monica Coll, Pasquale Striano, Carles Ferrer-Costa, Oscar Campuzano, Jesús Matés, Bernat del Olmo, Anna Iglesias, Alexandra Pérez-Serra, Irene Mademont, Ferran Picó, Antonio Oliva, Ramon Brugada

published 19 Dec 2017

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Familial episodic ataxia in lambs is potentially associated with a mutation in the fibroblast growth factor 14 (FGF14) gene

K. E. Dittmer, R. D. Jolly, I. G. Mayhew, A. L. Ridler, A. Chernyavtseva, D. J. Garrick, H. T. Blair

published 18 Dec 2017

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A confidence interval analysis of sampling effort, sequencing depth, and taxonomic resolution of fungal community ecology in the era of high-throughput sequencing

Ryoko Oono

published 18 Dec 2017

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Single molecule sequencing of the M13 virus genome without amplification

Luyang Zhao, Liwei Deng, Gailing Li, Huan Jin, Jinsen Cai, Huan Shang, Yan Li, Haomin Wu, Weibin Xu, Lidong Zeng, Renli Zhang, Huan Zhao, Ping Wu, Zhiliang Zhou, Jiao Zheng, Pierre Ezanno, Andrew X. Yang, Qin Yan, Michael W. Deem, Jiankui He

published 18 Dec 2017

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Genomic characterization and molecular evolution analysis of subtype B and BF recombinant HIV-1 strains among Argentinean men who have sex with men reveal a complex scenario

Cintia G. Cevallos, Leandro R. Jones, Maria A. Pando, Jean K. Carr, Maria M. Avila, Jorge Quarleri

published 15 Dec 2017

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