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Sequencing techniques

The enzymatic processing of α-dystroglycan by MMP-2 is controlled by two anchoring sites distinct from the active site

Magda Gioia, Giovanni Francesco Fasciglione, Diego Sbardella, Francesca Sciandra, MariaLuisa Casella, Serena Camerini, Marco Crescenzi, Alessandro Gori, Umberto Tarantino, Paola Cozza, Andrea Brancaccio, Massimo Coletta, Manuela Bozzi

published 15 Feb 2018

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Probiotic and anti-inflammatory potential of Lactobacillus rhamnosus 4B15 and Lactobacillus gasseri 4M13 isolated from infant feces

Nam Su Oh, Jae Yeon Joung, Ji Young Lee, Younghoon Kim

published 14 Feb 2018

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Waggawagga-CLI: A command-line tool for predicting stable single α-helices (SAH-domains), and the SAH-domain distribution across eukaryotes

Dominic Simm, Martin Kollmar

published 14 Feb 2018

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High-Throughput Tabular Data Processor – Platform independent graphical tool for processing large data sets

Piotr Madanecki, Magdalena Bałut, Patrick G. Buckley, J. Renata Ochocka, Rafał Bartoszewski, David K. Crossman, Ludwine M. Messiaen, Arkadiusz Piotrowski

published 12 Feb 2018

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Targeted liquid chromatography tandem mass spectrometry to quantitate wheat gluten using well-defined reference proteins

Kathrin Schalk, Peter Koehler, Katharina Anne Scherf

published 09 Feb 2018

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Technical adequacy of bisulfite sequencing and pyrosequencing for detection of mitochondrial DNA methylation: Sources and avoidance of false-positive detection

Chie Owa, Matthew Poulin, Liying Yan, Toshi Shioda

published 08 Feb 2018

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Transcriptional profiling of liver tissues in chicken embryo at day 16 and 20 using RNA sequencing reveals differential antioxidant enzyme activity

Shaohua Yang, Lu Lu Wang, Zhaoyuan Shi, Xiaoqian Ou, Wei Wang, Xue Chen, Guoqing Liu

published 06 Feb 2018

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Functional analysis of the C. elegans cyld-1 gene reveals extensive similarity with its human homolog

Paul Hadweh, Iro Chaitoglou, Maria Joao Gravato-Nobre, Petros Ligoxygakis, George Mosialos, Eudoxia Hatzivassiliou

published 02 Feb 2018

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Metabarcoding analysis of eukaryotic microbiota in the gut of HIV-infected patients

Ibrahim Hamad, Rita Abou Abdallah, Isabelle Ravaux, Saadia Mokhtari, Hervé Tissot-Dupont, Caroline Michelle, Andreas Stein, Jean-Christophe Lagier, Didier Raoult, Fadi Bittar

published 31 Jan 2018

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Target discovery screens using pooled shRNA libraries and next-generation sequencing: A model workflow and analytical algorithm

Christiane Schaefer, Nikhil Mallela, Jochen Seggewiß, Birgit Lechtape, Heymut Omran, Uta Dirksen, Eberhard Korsching, Jenny Potratz

published 31 Jan 2018

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T cell receptor repertoire among women who cleared and failed to clear cervical human papillomavirus infection: An exploratory proof-of-principle study

Krystle A. Lang Kuhs, Shih-Wen Lin, Xing Hua, Mark Schiffman, Robert D. Burk, Ana Cecilia Rodriguez, Rolando Herrero, Christian C. Abnet, Neal D. Freedman, Ligia A. Pinto, David Hamm, Harlan Robins, Allan Hildesheim, Jianxin Shi, Mahboobeh Safaeian

published 31 Jan 2018

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RNA-seq transcriptome analysis of the immature seeds of two Brassica napus lines with extremely different thousand-seed weight to identify the candidate genes related to seed weight

Xinxin Geng, Na Dong, Yuquan Wang, Gan Li, Lijun Wang, Xuejiao Guo, Jiabing Li, Zhaopu Wen, Wenhui Wei

published 30 Jan 2018

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Study of formation of green eggshell color in ducks through global gene expression

Fa Qiong Xu, Ang Li, Jing Jing Lan, Yue Ming Wang, Mei Jiao Yan, Sen Yang Lian, Xu Wu

published 29 Jan 2018

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