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Sequencing techniques

Evaluation of simulation models to mimic the distortions introduced into squiggles by nanopore sequencers and segmentation algorithms

Michael Smith, Rachel Chan, Paul Gordon

published 18 Jul 2019

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Defining the binding interface of Amyloid Precursor Protein (APP) and Contactin3 (CNTN3) by site-directed mutagenesis

Xi Peng, John Williams, Philip M. Smallwood, Jeremy Nathans

published 18 Jul 2019

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Clonally expanded alpha-chain T-cell receptor (TCR) transcripts are present in aneurysmal lesions of patients with Abdominal Aortic Aneurysm (AAA)

Song Lu, John V. White, Raquel I. Judy, Lisa L. Merritt, Wan Lu Lin, Xiaoying Zhang, Charalambos Solomides, Ifeyinwa Nwaneshiudu, John Gaughan, Dimitri S. Monos, Emilia L. Oleszak, Chris D. Platsoucas

published 16 Jul 2019

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Co-expression analysis reveals dysregulated miRNAs and miRNA-mRNA interactions in the development of contrast-induced acute kidney injury

Zhiqing Wang, Weiwei Bao, Xiaobiao Zou, Ping Tan, Hao Chen, Cancan Lai, Donglin Liu, Zhurong Luo, Mingfang Huang

published 15 Jul 2019

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Transcriptomic profiling and analysis of differentially expressed genes in asparagus bean (Vigna unguiculata ssp. sesquipedalis) under salt stress

Lei Pan, Xiaolu Yu, Jingjie Shao, Zhichao Liu, Tong Gao, Yu Zheng, Chen Zeng, Chengzhi Liang, Chanyou Chen

published 12 Jul 2019

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Sequence and phylogenetic analysis of novel porcine parvovirus 7 isolates from pigs in Guangxi, China

Wei Wang, Liang Cao, Wenchao Sun, Jialiang Xin, Min Zheng, Mingyao Tian, Huijun Lu, Ningyi Jin

published 10 Jul 2019

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Hybrid gene misregulation in multiple developing tissues within a recent adaptive radiation of Cyprinodon pupfishes

Joseph A. McGirr, Christopher H. Martin

published 10 Jul 2019

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Transcriptome profiling of mouse brain and lung under Dip2a regulation using RNA-sequencing

Rajiv Kumar Sah, Analn Yang, Fatoumata Binta Bah, Salah Adlat, Ameer Ali Bohio, Zin Mar Oo, Chenhao Wang, May Zun Zaw Myint, Noor Bahadar, Luqing Zhang, Xuechao Feng, Yaowu Zheng

published 10 Jul 2019

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Computational framework for targeted high-coverage sequencing based NIPT

Hindrek Teder, Priit Paluoja, Kadri Rekker, Andres Salumets, Kaarel Krjutškov, Priit Palta

published 08 Jul 2019

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Genome-wide identification and comparative analysis of drought-related microRNAs in two maize inbred lines with contrasting drought tolerance by deep sequencing

Xuyang Liu, Xiaojing Zhang, Baocheng Sun, Luyang Hao, Cheng Liu, Dengfeng Zhang, Huaijun Tang, Chunhui Li, Yongxiang Li, Yunsu Shi, Xiaoqing Xie, Yanchun Song, Tianyu Wang, Yu Li

published 05 Jul 2019

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Cold storage conditions modify microRNA expressions for platelet transfusion

Nobuhiro Mukai, Yoshinobu Nakayama, Sachiyo Ishi, Takayuki Murakami, Satoru Ogawa, Kyoko Kageyama, Satoshi Murakami, Yuji Sasada, Jun Yoshioka, Yasufumi Nakajima

published 03 Jul 2019

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Utility of platforms Viteks MS and Microflex LT for the identification of complex clinical isolates that require molecular methods for their taxonomic classification

María Florencia Rocca, Rubén Barrios, Jonathan Zintgraff, Claudia Martínez, Lucía Irazu, Carlos Vay, Mónica Prieto

published 03 Jul 2019

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Evaluation of KRAS, NRAS and BRAF hotspot mutations detection for patients with metastatic colorectal cancer using direct DNA pipetting in a fully-automated platform and Next-Generation Sequencing for laboratory workflow optimisation

Pauline Gilson, Claire Franczak, Ludovic Dubouis, Marie Husson, Marie Rouyer, Jessica Demange, Marie Perceau, Agnès Leroux, Jean-Louis Merlin, Alexandre Harlé

published 02 Jul 2019

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