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Sequencing techniques

Assessing the generalization capabilities of TCR binding predictors via peptide distance analysis

Leonardo V. Castorina, Filippo Grazioli, Pierre Machart, Anja Mösch, Federico Errica

published 20 May 2025

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Synovial Gene expression after Hemarthrosis differs between FVIII-deficient mice treated with recombinant FVIII or FVIII-Fc Fusion Protein

Bilgimol Chumappumkal Joseph, Thomas C. Whisenant, Esther J. Cooke, Jenny Y. Zhou, Nicca Falah, Juan Andres De-Pablo Moreno, Annette von Drygalski

published 19 May 2025

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Diagnosis, clinical features, and mortality risk factors in a Chinese cohort with pulmonary mucormycosis

Junjun Wan, Teng Liu, Fang Li, Shaohua Xu

published 16 May 2025

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Identification of insertion sites for the integrative and conjugative element Tn916 in the Bacillus subtilis chromosome

Emily L. Bean, Janet L. Smith, Alan D. Grossman

published 16 May 2025

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RNA degradation patterns in cardiac tissues kept at different time intervals and temperatures before RNA sequencing

Stine Bøttcher Jacobsen, Jacob Tfelt-Hansen, Morten Holdgaard Smerup, Niels Morling, Jeppe Dyrberg Andersen

published 15 May 2025

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Microglia remodeling in the visual thalamus of the DBA/2J mouse model of glaucoma

Jennifer L. Thompson, Shaylah McCool, Jennie C. Smith, Victoria Schaal, Gurudutt Pendyala, Sowmya Yelamanchili, Matthew J. Van Hook

published 15 May 2025

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A systematic review and meta-analysis of the diagnostic accuracy after preimplantation genetic testing for aneuploidy

Vanessa Bacal, Angela Li, Heather Shapiro, Urvi Rana, Rhonda Zwingerman, Lisa Avery, Alina Palermo, Eleni Philipoppolous, Crystal Chan

published 14 May 2025

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iProtDNA-SMOTE: Enhancing protein-DNA binding sites prediction through imbalanced graph neural networks

Ruiyan Huang, Wangren Qiu, Xuan Xiao, Weizhong Lin

published 13 May 2025

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DNA extraction protocols for animal fecal material on blood spot cards

Ann-Katrin Llarena, Thomas H. A. Haverkamp, Wenche Støldal Gulliksen, Kristin Herstad, Arne Holst-Jensen, Eystein Skjerve, Lisbeth Rannem, Sabrina Rodriguez-Campos, Øivind Øines

published 12 May 2025

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Epidemiological investigation and analysis of the genetic evolution of duck circovirus in China, 2022

Peidong Li, Fuyou Zhang, Chunyang Bao, Hongmei Liu, Kai Yu, Hao Zhu, Xue Wang, Ke Shen, Tianyao Yang, Qingqing Song, Zhaoyang Li, Chunguo Liu

published 09 May 2025

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Integrating genomics and transcriptomics reveals candidate genes affecting loin muscle area in Huaxi cattle

Qingqing Xue, Lili Du, Tianyu Deng, Mang Liang, Keanning Li, Li Qian, Shiyuan Qiu, Yan Chen, Xue Gao, Lingyang Xu, Zezhao Wang, Caihong Zheng, Lupei Zhang, Junya Li, Huijiang Gao

published 09 May 2025

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TempO-seq and RNA-seq gene expression levels are highly correlated for most genes: A comparison using 39 human cell lines

Laura J. Word, Clinton M. Willis, Richard S. Judson, Logan J. Everett, Sarah E. Davidson-Fritz, Derik E. Haggard, Bryant A. Chambers, Jesse D. Rogers, Joseph L. Bundy, Imran Shah, Nisha S. Sipes, Joshua A. Harrill

published 09 May 2025

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Finding patterns in lung cancer protein sequences for drug repurposing

Belén Otero-Carrasco, Paloma Tejera Nevado, Rafael Artiñano Muñoz, Gema Díaz Ferreiro, Aurora Pérez Pérez, Juan Pedro Caraça-Valente Hernández, Alejandro Rodríguez-González

published 07 May 2025

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