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Sequence databases

GPU-Acceleration of Sequence Homology Searches with Database Subsequence Clustering

Shuji Suzuki, Masanori Kakuta, Takashi Ishida, Yutaka Akiyama

Next-Generation Sequencing of an 88-Year-Old Specimen of the Poorly Known Species Liagora japonica (Nemaliales, Rhodophyta) Supports the Recognition of Otohimella gen. nov.

Masahiro Suzuki, Takahiro Segawa, [ ... ], Hisayoshi Nozaki

FastRNABindR: Fast and Accurate Prediction of Protein-RNA Interface Residues

Yasser EL-Manzalawy, Mostafa Abbas, Qutaibah Malluhi, Vasant Honavar

Identification of an NAC Transcription Factor Family by Deep Transcriptome Sequencing in Onion (Allium cepa L.)

Xia Zheng, Shouwei Tang, [ ... ], Touming Liu

A Bacterial Analysis Platform: An Integrated System for Analysing Bacterial Whole Genome Sequencing Data for Clinical Diagnostics and Surveillance

Martin Christen Frølund Thomsen, Johanne Ahrenfeldt, [ ... ], Ole Lund

BLAT2DOLite: An Online System for Identifying Significant Relationships between Genetic Sequences and Diseases

Liang Cheng, Shuo Zhang, Yang Hu

Large-Scale Monitoring of Plants through Environmental DNA Metabarcoding of Soil: Recovery, Resolution, and Annotation of Four DNA Markers

Nicole A. Fahner, Shadi Shokralla, Donald J. Baird, Mehrdad Hajibabaei

Northeast India Helminth Parasite Information Database (NEIHPID): Knowledge Base for Helminth Parasites

Devendra Kumar Biswal, Manish Debnath, [ ... ], Veena Tandon

Insights into Sexual Precocity of Female Oriental River Prawn Macrobrachium nipponense through Transcriptome Analysis

Hongxia Jiang, Xilian Li, [ ... ], Xiaolin Liu

Genome-Wide Comparative Analysis of the Phospholipase D Gene Families among Allotetraploid Cotton and Its Diploid Progenitors

Kai Tang, Chun-Juan Dong, Jin-Yuan Liu

The Challenges of Implementing Next Generation Sequencing Across a Large Healthcare System, and the Molecular Epidemiology and Antibiotic Susceptibilities of Carbapenemase-Producing Bacteria in the Healthcare System of the U.S. Department of Defense

Emil Lesho, Robert Clifford, [ ... ], Mary Hinkle

Ultra-Deep Sequencing of HIV-1 near Full-Length and Partial Proviral Genomes Reveals High Genetic Diversity among Brazilian Blood Donors

Rodrigo Pessôa, Paula Loureiro, [ ... ], Sabri S Sanabani

Development of Gene-Based SSR Markers in Rice Bean (Vigna umbellata L.) Based on Transcriptome Data

Honglin Chen, Xin Chen, [ ... ], Xuzhen Cheng

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