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Sequence databases

Piphillin: Improved Prediction of Metagenomic Content by Direct Inference from Human Microbiomes

Shoko Iwai, Thomas Weinmaier, [ ... ], Todd Z. DeSantis

Use of Combined MSAP and NGS Techniques to Identify Differentially Methylated Regions in Somaclones: A Case Study of Two Stable Somatic Wheat Mutants

Miroslav Baránek, Jana Čechová, [ ... ], Xingguo Ye

Genetic Characteristics and Multiple-PCR Development for Capsular Identification of Specific Serotypes of Campylobacter jejuni

Hao Liang, Aiyu Zhang, [ ... ], Maojun Zhang

De Novo Sequencing and Assembly Analysis of the Pseudostellaria heterophylla Transcriptome

Jun Li, Wei Zhen, [ ... ], Luqi Huang

Microbial Potential for Ecosystem N Loss Is Increased by Experimental N Deposition

Zachary B. Freedman, Rima A. Upchurch, Donald R. Zak

MetaPhinder—Identifying Bacteriophage Sequences in Metagenomic Data Sets

Vanessa Isabell Jurtz, Julia Villarroel, [ ... ], Morten Nielsen

MetaStorm: A Public Resource for Customizable Metagenomics Annotation

Gustavo Arango-Argoty, Gargi Singh, [ ... ], Liqing Zhang

Uncovering Trophic Interactions in Arthropod Predators through DNA Shotgun-Sequencing of Gut Contents

Débora P. Paula, Benjamin Linard, [ ... ], Alfried P. Vogler

Typhoidal Salmonellae: Use of Multi-Locus Sequence Typing to Determine Population Structure

Priyanka Sharma, Sushila Dahiya, [ ... ], Arti Kapil

Genetic Barrier to Direct Acting Antivirals in HCV Sequences Deposited in the European Databank

Dimas Alexandre Kliemann, Cristiane Valle Tovo, [ ... ], John West

Supervised Learning for Detection of Duplicates in Genomic Sequence Databases

Qingyu Chen, Justin Zobel, Xiuzhen Zhang, Karin Verspoor

GPU-Acceleration of Sequence Homology Searches with Database Subsequence Clustering

Shuji Suzuki, Masanori Kakuta, Takashi Ishida, Yutaka Akiyama

Next-Generation Sequencing of an 88-Year-Old Specimen of the Poorly Known Species Liagora japonica (Nemaliales, Rhodophyta) Supports the Recognition of Otohimella gen. nov.

Masahiro Suzuki, Takahiro Segawa, [ ... ], Hisayoshi Nozaki

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