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Sequence analysis

LMDIPred: A web-server for prediction of linear peptide sequences binding to SH3, WW and PDZ domains

Debasree Sarkar, Tanmoy Jana, Sudipto Saha

published 12 Jul 2018

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Radio-sensitizing effects of VE-821 and beyond: Distinct phosphoproteomic and metabolomic changes after ATR inhibition in irradiated MOLT-4 cells

Barbora Šalovská, Hana Janečková, Ivo Fabrik, Radana Karlíková, Lucie Čecháková, Martin Ondrej, Marek Link, David Friedecký, Aleš Tichý

published 12 Jul 2018

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Integrative approach on Pharyngodonidae (Nematoda: Oxyuroidea) parasitic in reptiles: Relationship among its genera, importance of their diagnostic features, and new data on Parapharyngodon bainae

Felipe Bisaggio Pereira, José Luis Luque, Luiz Eduardo Roland Tavares

published 11 Jul 2018

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Analytical “bake-off” of whole genome sequencing quality for the Genome Russia project using a small cohort for autoimmune hepatitis

Daria V. Zhernakova, Sergei Kliver, Nikolay Cherkasov, Gaik Tamazian, Mikhail Rotkevich, Ksenia Krasheninnikova, Igor Evsyukov, Sviatoslav Sidorov, Pavel Dobrynin, Andrey A. Yurchenko, Valentin Shimansky, Irina V. Shcherbakova, Andrey S. Glotov, David L. Valle, Minzhong Tang, Emilia Shin, Kathleen B. Schwarz, Stephen J. O'Brien

published 11 Jul 2018

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Largely different carotenogenesis in two pummelo fruits with different flesh colors

Fuhua Yan, Meiyan Shi, Zhenyu He, Lianhai Wu, Xianghua Xu, Min He, Jiajing Chen, Xiuxin Deng, Yunjiang Cheng, Juan Xu

published 09 Jul 2018

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Molecular marker sequences of cattle Cooperia species identify Cooperia spatulata as a morphotype of Cooperia punctata

Sabrina Ramünke, Fernando de Almeida Borges, Elke von Son-de Fernex, Georg von Samson-Himmelstjerna, Jürgen Krücken

published 06 Jul 2018

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Genetics instability of wtAAV2 genome and AAV promoter activities in the Baculovirus/Sf9 cells system

Adrien Savy, Minna U. Kaikkonen, Adrien Léger, Yohann Dickx, Lionel Galibert, Otto-Wilhelm Merten

published 05 Jul 2018

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Whole genome comparison of Aspergillus flavus L-morphotype strain NRRL 3357 (type) and S-morphotype strain AF70

Matthew K. Gilbert, Brian M. Mack, Geromy G. Moore, Darlene L. Downey, Matthew D. Lebar, Vinita Joardar, Liliana Losada, JiuJiang Yu, William C. Nierman, Deepak Bhatnagar

published 02 Jul 2018

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Molecular identification and functional characterization of the cathepsin B gene (Ab-cb-1) in the plant parasitic nematode Aphelenchoides besseyi

Hong-Le Wang, Xi Cheng, Shan-Wen Ding, Dong-Wei Wang, Chun Chen, Chun-Ling Xu, Hui Xie

published 29 Jun 2018

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The role of polyproline motifs in the histidine kinase EnvZ

Magdalena Motz, Kirsten Jung

published 28 Jun 2018

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Contact prediction is hardest for the most informative contacts, but improves with the incorporation of contact potentials

Jack Holland, Qinxin Pan, Gevorg Grigoryan

published 28 Jun 2018

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Fast sequence analysis based on diamond sampling

Liangxin Gao, Wenzhen Bao, Hongbo Zhang, Chang-An Yuan, De-Shuang Huang

published 28 Jun 2018

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trnL outperforms rbcL as a DNA metabarcoding marker when compared with the observed plant component of the diet of wild white-faced capuchins (Cebus capucinus, Primates)

Elizabeth K. Mallott, Paul A. Garber, Ripan S. Malhi

published 26 Jun 2018

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