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Sequence analysis

Reassembling haplotypes in a mixture of pooled amplicons when the relative concentrations are known: A proof-of-concept study on the efficient design of next-generation sequencing strategies

Louis Ranjard, Thomas K. F. Wong, Allen G. Rodrigo

Automated C. elegans embryo alignments reveal brain neuropil position invariance despite lax cell body placement

Peter Insley, Shai Shaham

Worldwide increased prevalence of human adenovirus type 3 (HAdV-3) respiratory infections is well correlated with heterogeneous hypervariable regions (HVRs) of hexon

Ezazul Haque, Urmila Banik, [ ... ], Arun Kumar Adhikary

Using mating-type loci to improve taxonomy of the Tuber indicum complex, and discovery of a new species, T. longispinosum

Akihiko Kinoshita, Kazuhide Nara, [ ... ], Takashi Yamanaka

Genomic diversity of Taylorella equigenitalis introduced into the United States from 1978 to 2012

Jessica Hicks, Tod Stuber, [ ... ], Xiaoqiu Huang

HMMER Cut-off Threshold Tool (HMMERCTTER): Supervised classification of superfamily protein sequences with a reliable cut-off threshold

Inti Anabela Pagnuco, María Victoria Revuelta, [ ... ], Arjen ten Have

Bioinformatic characterization of the Anoctamin Superfamily of Ca²⁺-activated ion channels and lipid scramblases

Arturo Medrano-Soto, Gabriel Moreno-Hagelsieb, [ ... ], Milton H. Saier Jr.

Fecal microbiota in the female prairie vole (Microtus ochrogaster)

J. Thomas Curtis, Senait Assefa, Amie Francis, Gerwald A. Köhler

Nascent RNA signaling to yeast RNA Pol II during transcription elongation

Eva Klopf, Murielle Moes, [ ... ], Renée Schroeder

Development of an improved RT-qPCR Assay for detection of Japanese encephalitis virus (JEV) RNA including a systematic review and comprehensive comparison with published methods

Tehmina Bharucha, Onanong Sengvilaipaseuth, [ ... ], Audrey Dubot-Pérès

Early MinION^™ nanopore single-molecule sequencing technology enables the characterization of hepatitis B virus genetic complexity in clinical samples

Virginie Sauvage, Laure Boizeau, [ ... ], Syria Laperche

Proteomic endorsed transcriptomic profiles of venom glands from Tityus obscurus and T. serrulatus scorpions

Ursula Castro de Oliveira, Milton Yutaka Nishiyama Jr., [ ... ], Inácio de Loiola Meirelles Junqueira-de-Azevedo

Proteomic analysis of a Candida albicans pir32 null strain reveals proteins involved in adhesion, filamentation and virulence

Pamela El Khoury, Andy Awad, Brigitte Wex, Roy A. Khalaf

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