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Sequence analysis

GCalignR: An R package for aligning gas-chromatography data for ecological and evolutionary studies

Meinolf Ottensmann, Martin A. Stoffel, Hazel J. Nichols, Joseph I. Hoffman

published 07 Jun 2018

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Evaluation of different analysis pipelines for the detection of HIV-1 minority resistant variants

Marine Perrier, Nathalie Désiré, Alexandre Storto, Eve Todesco, Christophe Rodriguez, Mélanie Bertine, Quentin Le Hingrat, Benoit Visseaux, Vincent Calvez, Diane Descamps, Anne-Geneviève Marcelin, Charlotte Charpentier

published 01 Jun 2018

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Protein alignment based on higher order conditional random fields for template-based modeling

Juan A. Morales-Cordovilla, Victoria Sanchez, Martin Ratajczak

published 01 Jun 2018

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Clustered intergenic region sequences as predictors of factor H Binding Protein expression patterns and for assessing Neisseria meningitidis strain coverage by meningococcal vaccines

Caroline Cayrou, Ayodeji A. Akinduko, Evgeny M. Mirkes, Jay Lucidarme, Stephen A. Clark, Luke R. Green, Helen J. Cooper, Julie Morrissey, Ray Borrow, Christopher D. Bayliss

published 30 May 2018

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Molecular gut content analysis of different spider body parts

Nuria Macías-Hernández, Kacie Athey, Vanina Tonzo, Owen S. Wangensteen, Miquel Arnedo, James D. Harwood

published 30 May 2018

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Fungal-type carbohydrate binding modules from the coccolithophore Emiliania huxleyi show binding affinity to cellulose and chitin

Bart J. M. Rooijakkers, Martina S. Ikonen, Markus B. Linder

published 21 May 2018

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Another cat and mouse game: Deciphering the evolution of the SCGB superfamily and exploring the molecular similarity of major cat allergen Fel d 1 and mouse ABP using computational approaches

Rajesh Durairaj, Patrick Pageat, Cécile Bienboire-Frosini

published 17 May 2018

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ChIP-exo interrogation of Crp, DNA, and RNAP holoenzyme interactions

Haythem Latif, Stephen Federowicz, Ali Ebrahim, Janna Tarasova, Richard Szubin, Jose Utrilla, Karsten Zengler, Bernhard O. Palsson

published 17 May 2018

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Evolutionary and genomic analysis of the caleosin/peroxygenase (CLO/PXG) gene/protein families in the Viridiplantae

Farzana Rahman, Mehedi Hassan, Rozana Rosli, Ibrahem Almousally, Abdulsamie Hanano, Denis J. Murphy

published 17 May 2018

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Sequencing of complete mitochondrial genomes confirms synonymization of Hyalomma asiaticum asiaticum and kozlovi, and advances phylogenetic hypotheses for the Ixodidae

Zhi-Qiang Liu, Yan-Feng Liu, Nuer Kuermanali, Deng-Feng Wang, Shi-Jun Chen, Hui-Ling Guo, Li Zhao, Jun-Wei Wang, Tao Han, Yuan-Zhi Wang, Jie Wang, Chen-Feng Shen, Zhuang-Zhi Zhang, Chuang-Fu Chen

published 16 May 2018

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A comparative study of RNA-Seq and microarray data analysis on the two examples of rectal-cancer patients and Burkitt Lymphoma cells

Alexander Wolff, Michaela Bayerlová, Jochen Gaedcke, Dieter Kube, Tim Beißbarth

published 16 May 2018

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A novel specific duplex real-time RT-PCR method for absolute quantitation of Grapevine Pinot gris virus in plant material and single mites

Félix Morán, Antonio Olmos, Leonidas Lotos, Lukáš Predajňa, Nikolaos Katis, Miroslav Glasa, Varvara Maliogka, Ana B. Ruiz-García

published 15 May 2018

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Circularly permuted variants of two CG-specific prokaryotic DNA methyltransferases

Pál Albert, Bence Varga, Nikolett Zsibrita, Antal Kiss

published 10 May 2018

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