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Sequence analysis

elPrep 4: A multithreaded framework for sequence analysis

Charlotte Herzeel, Pascal Costanza, Dries Decap, Jan Fostier, Wilfried Verachtert

published 13 Feb 2019

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A combined computational strategy of sequence and structural analysis predicts the existence of a functional eicosanoid pathway in Drosophila melanogaster

Michael Scarpati, Yan Qi, Shubha Govind, Shaneen Singh

published 12 Feb 2019

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Testing of library preparation methods for transcriptome sequencing of real life glioblastoma and brain tissue specimens: A comparative study with special focus on long non-coding RNAs

Marek Vecera, Jiri Sana, Jan Oppelt, Boris Tichy, Kopkova Alena, Radim Lipina, Martin Smrcka, Radim Jancalek, Marketa Hermanova, Leos Kren, Ondrej Slaby

published 11 Feb 2019

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Analysis of Anasplatyrhynchos genome resequencing data reveals genetic signatures of artificial selection

Tieshan Xu, Lihong Gu, Haopeng Yu, Xuefei Jiang, Yunsheng Zhang, Xiaohui Zhang, Guang Rong, Zhengkui Zhou, Kyle M. Schachtschneider, Shuisheng Hou

published 08 Feb 2019

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Weighted lambda superstrings applied to vaccine design

Luis Martínez, Martin Milanič, Iker Malaina, Carmen Álvarez, Martín-Blas Pérez, Ildefonso M. de la Fuente

published 08 Feb 2019

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The complete genome sequence of an alphabaculovirus from Spodoptera exempta, an agricultural pest of major economic significance in Africa

Shannon R. Escasa, Robert L. Harrison, Joseph D. Mowery, Gary R. Bauchan, Jenny S. Cory

published 08 Feb 2019

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Comparative genome analysis of Korean field strains of infectious laryngotracheitis virus

Tae-Min La, Eun-Jung Choi, Joong-Bok Lee, Seung-Yong Park, Chang-Seon Song, In-Soo Choi, Sang-Won Lee

published 07 Feb 2019

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Evolution of the modular, disordered stress proteins known as dehydrins

Andrew C. Riley, Daniel A. Ashlock, Steffen P. Graether

published 06 Feb 2019

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R pyocin tail fiber structure reveals a receptor-binding domain with a lectin fold

Adam J. Salazar, Mukul Sherekar, Jennifer Tsai, James C. Sacchettini

published 05 Feb 2019

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HuVarBase: A human variant database with comprehensive information at gene and protein levels

Kaliappan Ganesan, A. Kulandaisamy, S. Binny Priya, M. Michael Gromiha

published 31 Jan 2019

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Contrasting patterns of gene expression indicate differing pyrethroid resistance mechanisms across the range of the New World malaria vector Anopheles albimanus

Lucy Mackenzie-Impoinvil, Gareth D. Weedall, Juan C. Lol, Jesús Pinto, Lucrecia Vizcaino, Nicole Dzuris, Jacob Riveron, Norma Padilla, Charles Wondji, Audrey Lenhart

published 30 Jan 2019

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Non-sequential protein structure alignment by conformational space annealing and local refinement

InSuk Joung, Jong Yun Kim, Keehyoung Joo, Jooyoung Lee

published 30 Jan 2019

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Development and validation of probe-based multiplex real-time PCR assays for the rapid and accurate detection of freshwater fish species

Emily N. Hulley, Sujeenthar Tharmalingam, Andrew Zarnke, Douglas R. Boreham

published 30 Jan 2019

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