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Sequence analysis

Discovery of a Streptococcus pneumoniae serotype 33F capsular polysaccharide locus that lacks wcjE and contains a wcyO pseudogene

Sam Manna, Eileen M. Dunne, Belinda D. Ortika, Casey L. Pell, Mike Kama, Fiona M. Russell, Tuya Mungun, E. Kim Mulholland, Jason Hinds, Catherine Satzke

published 05 Nov 2018

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Approaches to variant discovery for conifer transcriptome sequencing

Emily Telfer, Natalie Graham, Lucy Macdonald, Shane Sturrock, Phillip Wilcox, Lisa Stanbra

published 05 Nov 2018

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De novo assembly of wheat root transcriptomes and transcriptional signature of longitudinal differentiation

Ghana Shyam Challa, Wanlong Li

published 05 Nov 2018

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Comparative genomic and methylome analysis of non-virulent D74 and virulent Nagasaki Haemophilus parasuis isolates

Tracy L. Nicholson, Brian W. Brunelle, Darrell O. Bayles, David P. Alt, Sarah M. Shore

published 01 Nov 2018

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Genomic distribution of a novel Pyrenophora tritici-repentis ToxA insertion element

Paula M. Moolhuijzen, Pao Theen See, Richard P. Oliver, Caroline S. Moffat

published 31 Oct 2018

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Characterizing the relation of functional and Early Folding Residues in protein structures using the example of aminoacyl-tRNA synthetases

Sebastian Bittrich, Michael Schroeder, Dirk Labudde

published 30 Oct 2018

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Evaluation of the ribosomal DNA internal transcribed spacer (ITS), specifically ITS1 and ITS2, for the analysis of fungal diversity by deep sequencing

Rui-Heng Yang, Jin-He Su, Jun-Jun Shang, Ying-Ying Wu, Yan Li, Da-Peng Bao, Yi-Jian Yao

published 25 Oct 2018

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Haplotyping of Cornus florida and C. kousa chloroplasts: Insights into species-level differences and patterns of plastic DNA variation in cultivars

Marcin Nowicki, Sarah L. Boggess, Arnold M. Saxton, Denita Hadziabdic, Qiu-Yun Jenny Xiang, Thomas Molnar, Matthew L. Huff, Margaret E. Staton, Yichen Zhao, Robert N. Trigiano

published 23 Oct 2018

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Genome-wide identification of evolutionarily conserved Small Heat-Shock and eight other proteins bearing α-crystallin domain-like in kinetoplastid protists

André G. Costa-Martins, Luciana Lima, João Marcelo P. Alves, Myrna G. Serrano, Gregory A. Buck, Erney P. Camargo, Marta M. G. Teixeira

published 22 Oct 2018

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Two novel temperate bacteriophages infecting Streptococcus pyogenes: Their genomes, morphology and stability

Marek Harhala, Jakub Barylski, Kinga Humińska-Lisowska, Dorota Lecion, Jacek Wojciechowicz, Karolina Lahutta, Marta Kuś, Andrew M. Kropinski, Sylwia Nowak, Grzegorz Nowicki, Katarzyna Hodyra-Stefaniak, Krystyna Dąbrowska

published 19 Oct 2018

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Transcriptomic analysis of the salivary gland of medicinal leech Hirudo nipponia

Zenghui Lu, Ping Shi, Huajian You, Yanqi Liu, Shijiang Chen

published 19 Oct 2018

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miRWalk: An online resource for prediction of microRNA binding sites

Carsten Sticht, Carolina De La Torre, Alisha Parveen, Norbert Gretz

published 18 Oct 2018

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Identification of an apiosyltransferase in the plant pathogen Xanthomonas pisi

James Amor Smith, Maor Bar-Peled

published 18 Oct 2018

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