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Sequence analysis

DNA barcoding and TLC as tools to properly identify natural populations of the Mexican medicinal species Galphimia glauca Cav

Reinier Gesto-Borroto, Alexandre Cardoso-Taketa, Jessica P. Yactayo-Chang, Karina Medina-Jiménez, Claudia Hornung-Leoni, Argelia Lorence, Maria Luisa Villarreal

published 28 May 2019

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Discovering cryptic species in the Aspiciliella intermutans complex (Megasporaceae, Ascomycota) – First results using gene concatenation and coalescent-based species tree approaches

Zakieh Zakeri, Volker Otte, Harrie Sipman, Jiří Malíček, Paloma Cubas, Víctor J. Rico, Veronika Lenzová, David Svoboda, Pradeep K. Divakar

published 28 May 2019

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Loss of function mutation of the Rapid Alkalinization Factor (RALF1)-like peptide in the dandelion Taraxacum koksaghyz entails a high-biomass taproot phenotype

Annika Wieghaus, Dirk Prüfer, Christian Schulze Gronover

published 24 May 2019

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Transcripts with systematic nucleotide deletion of 1-12 nucleotide in human mitochondrion suggest potential non-canonical transcription

Ganesh Warthi, Hervé Seligmann

published 23 May 2019

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The population genetic structure approach adds new insights into the evolution of plant LTR retrotransposon lineages

Vanessa Fuentes Suguiyama, Luiz Augusto Baciega Vasconcelos, Maria Magdalena Rossi, Cibele Biondo, Nathalia de Setta

published 20 May 2019

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Identification and quantification of defective virus genomes in high throughput sequencing data using DVG-profiler, a novel post-sequence alignment processing algorithm

Trent J. Bosma, Konstantinos Karagiannis, Luis Santana-Quintero, Natalia Ilyushina, Tatiana Zagorodnyaya, Svetlana Petrovskaya, Majid Laassri, Raymond P. Donnelly, Steven Rubin, Vahan Simonyan, Christian J. Sauder

published 17 May 2019

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Reading canonical and modified nucleobases in 16S ribosomal RNA using nanopore native RNA sequencing

Andrew M. Smith, Miten Jain, Logan Mulroney, Daniel R. Garalde, Mark Akeson

published 16 May 2019

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Structure and evolution of the 4-helix bundle domain of Zuotin, a J-domain protein co-chaperone of Hsp70

Om Kumar Shrestha, Ruchika Sharma, Bartlomiej Tomiczek, Woonghee Lee, Marco Tonelli, Gabriel Cornilescu, Milena Stolarska, Lukasz Nierzwicki, Jacek Czub, John L. Markley, Jaroslaw Marszalek, Szymon J. Ciesielski, Elizabeth A. Craig

published 15 May 2019

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Copy number variants in kiwifruit ETHYLENE RESPONSE FACTOR/APETALA2 (ERF/AP2)-like genes show divergence in fruit ripening associated cold and ethylene responses in C-REPEAT/DRE BINDING FACTOR-like genes

Kularajathevan Gunaseelan, Peter A. McAtee, Simona Nardozza, Paul Pidakala, Ruiling Wang, Karine David, Jeremy Burdon, Robert J. Schaffer

published 13 May 2019

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Evolution of organellar genes of chlorophyte algae: Relevance to phylogenetic inference

Nuttapong Mekvipad, Anchittha Satjarak

published 06 May 2019

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Mining and characterization of novel EST-SSR markers of Parrotia subaequalis (Hamamelidaceae) from the first Illumina-based transcriptome datasets

Yunyan Zhang, Mengyuan Zhang, Yimin Hu, Xin Zhuang, Wuqin Xu, Pengfu Li, Zhongsheng Wang

published 06 May 2019

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The biosynthetic pathway to ossamycin, a macrocyclic polyketide bearing a spiroacetal moiety

Oksana Bilyk, Markiyan Samborskyy, Peter F. Leadlay

published 30 Apr 2019

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Genome-wide identification and gene expression pattern of ABC transporter gene family in Capsicum spp.

Carlos Lopez-Ortiz, Sudip Kumar Dutta, Purushothaman Natarajan, Yadira Peña-Garcia, Venkata Abburi, Thangasamy Saminathan, Padma Nimmakayala, Umesh K. Reddy

published 30 Apr 2019

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