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Sequence analysis

The diversity and abundance of fungi and bacteria on the healthy and dandruff affected human scalp

Sally G. Grimshaw, Adrian M. Smith, David S. Arnold, Elaine Xu, Michael Hoptroff, Barry Murphy

published 18 Dec 2019

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Increased performance of DNA metabarcoding of macroinvertebrates by taxonomic sorting

Kevin K. Beentjes, Arjen G. C. L. Speksnijder, Menno Schilthuizen, Marten Hoogeveen, Rob Pastoor, Berry B. van der Hoorn

published 16 Dec 2019

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Application of DArT seq derived SNP tags for comparative genome analysis in fishes; An alternative pipeline using sequence data from a non-traditional model species, Macquaria ambigua

Foyez Shams, Fiona Dyer, Ross Thompson, Richard P. Duncan, Jason D. Thiem, Andrzej Kilian, Tariq Ezaz

published 12 Dec 2019

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Not so unique to Primates: The independent adaptive evolution of TRIM5 in Lagomorpha lineage

Ana Águeda-Pinto, Ana Lemos de Matos, Ana Pinheiro, Fabiana Neves, Patrícia de Sousa-Pereira, Pedro J. Esteves

published 12 Dec 2019

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Backward compatibility of whole genome sequencing data with MLVA typing using a new MLVAtype shiny application for Vibrio cholerae

Jérôme Ambroise, Léonid M. Irenge, Jean-François Durant, Bertrand Bearzatto, Godfrey Bwire, O. Colin Stine, Jean-Luc Gala

published 11 Dec 2019

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Dynamical comparison between Drosha and Dicer reveals functional motion similarities and dissimilarities

Rotem Aharoni, Dror Tobi

published 10 Dec 2019

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Optimizing sgRNA length to improve target specificity and efficiency for the GGTA1 gene using the CRISPR/Cas9 gene editing system

Anders W. Matson, Nora Hosny, Zachary A. Swanson, Bernhard J. Hering, Christopher Burlak

published 10 Dec 2019

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βC1, pathogenicity determinant encoded by Cotton leaf curl Multan betasatellite, interacts with calmodulin-like protein 11 (Gh-CML11) in Gossypium hirsutum

Hira Kamal, Fayyaz-ul-Amir Afsar Minhas, Diwaker Tripathi, Wajid Arshad Abbasi, Muhammad Hamza, Roma Mustafa, Muhammad Zuhaib Khan, Shahid Mansoor, Hanu R. Pappu, Imran Amin

published 03 Dec 2019

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The KLDpT activation loop motif is critical for MARK kinase activity

Tim Sonntag, James J. Moresco, John R. Yates III, Marc Montminy

published 03 Dec 2019

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Optimization of TripleTOF spectral simulation and library searching for confident localization of phosphorylation sites

Ayano Takai, Tomoya Tsubosaka, Yasuhiro Hirano, Naoki Hayakawa, Fumitaka Tani, Pekka Haapaniemi, Veronika Suni, Susumu Y. Imanishi

published 02 Dec 2019

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Characterisation of early metazoan secretion through associated signal peptidase complex subunits, prohormone convertases and carboxypeptidases of the marine sponge (Amphimedon queenslandica)

Michael J. Hammond, Tianfang Wang, Scott F. Cummins

published 12 Nov 2019

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Bioinformatic analysis of a novel Echinococcus granulosus nuclear receptor with two DNA binding domains

Gabriela Alvite, Ximena Riera, Saira Cancela, Margot Paulino, Adriana Esteves

published 11 Nov 2019

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Genome-wide identification and gene expression analysis of SOS family genes in tuber mustard (Brassica juncea var. tumida)

Chunhong Cheng, Yuanmei Zhong, Qing Wang, Zhaoming Cai, Diandong Wang, Changman Li

published 11 Nov 2019

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