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Sequence analysis

Sergentomyia schwetzi: Salivary gland transcriptome, proteome and enzymatic activities in two lineages adapted to different blood sources

Nikola Polanska, Aygul Ishemgulova, Vera Volfova, Pavel Flegontov, Jan Votypka, Vyacheslav Yurchenko, Petr Volf

published 24 Mar 2020

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Identification, molecular characterization and expression of JAZ genes in Lycoris aurea

Peng Wang, Shuojun Yu, Xiaokang Han, Junya Xu, Qingyuan He, Sheng Xu, Ren Wang

published 17 Mar 2020

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Comparative analysis of novel MGISEQ-2000 sequencing platform vs Illumina HiSeq 2500 for whole-genome sequencing

Dmitriy Korostin, Nikolay Kulemin, Vladimir Naumov, Vera Belova, Dmitriy Kwon, Alexey Gorbachev

published 16 Mar 2020

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Structural variation, functional differentiation and expression characteristics of the AP2/ERF gene family and its response to cold stress and methyl jasmonate in Panax ginseng C.A. Meyer

Jing Chen, Yuanhang Zhou, Qi Zhang, Qian Liu, Li Li, Chunyu Sun, Kangyu Wang, Yanfang Wang, Mingzhu Zhao, Hongjie Li, Yilai Han, Ping Chen, Ruiqi Li, Jun Lei, Meiping Zhang, Yi Wang

published 16 Mar 2020

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Learning supervised embeddings for large scale sequence comparisons

Dhananjay Kimothi, Pravesh Biyani, James M. Hogan, Akshay Soni, Wayne Kelly

published 13 Mar 2020

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Study of susceptibility to antibiotics and molecular characterization of high virulence Staphylococcus aureus strains isolated from a rural hospital in Ethiopia

Cristina Verdú-Expósito, Juan Romanyk, Juan Cuadros-González, Abraham TesfaMariam, José Luis Copa-Patiño, Jorge Pérez-Serrano, Juan Soliveri

published 12 Mar 2020

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Characterization of the prohormone complement in Amphiprion and related fish species integrating genome and transcriptome assemblies

Bruce R. Southey, Sandra L. Rodriguez-Zas, Justin S. Rhodes, Jonathan V. Sweedler

published 12 Mar 2020

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Difference contact maps: From what to why in the analysis of the conformational flexibility of proteins

Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Mayya Sedova, Adam Godzik

published 12 Mar 2020

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Extensive survey of the ycf4 plastid gene throughout the IRLC legumes: Robust evidence of its locus and lineage specific accelerated rate of evolution, pseudogenization and gene loss in the tribe Fabeae

Mahtab Moghaddam, Shahrokh Kazempour-Osaloo

published 05 Mar 2020

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Biophysicochemical motifs in T cell receptor sequences as a potential biomarker for high-grade serous ovarian carcinoma

Jared Ostmeyer, Elena Lucas, Scott Christley, Jayanthi Lea, Nancy Monson, Jasmin Tiro, Lindsay G. Cowell

published 05 Mar 2020

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Hexaploid sweetpotato (Ipomoea batatas (L.) Lam.) may not be a true type to either auto- or allopolyploid

Ming Gao, Sara Fuentes Soriano, Qinghe Cao, Xinsun Yang, Guquan Lu

published 03 Mar 2020

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Equiprobable discrete models of site-specific substitution rates underestimate the extent of rate variability

Frank Mannino, Sadie Wisotsky, Sergei L. Kosakovsky Pond, Spencer V. Muse

published 02 Mar 2020

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Differential sequences and single nucleotide polymorphism of exosomal SOX2 DNA in cancer

Manjusha Vaidya, Kiminobu Sugaya

published 24 Feb 2020

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