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Sequence analysis

Molecular characterization of porcine epidemic diarrhoea virus (PEDV) in Poland reveals the presence of swine enteric coronavirus (SeCoV) sequence in S gene

Marta Antas, Monika Olech, Anna Szczotka-Bochniarz

published 29 Oct 2021

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Sortase-mediated segmental labeling: A method for segmental assignment of intrinsically disordered regions in proteins

Kristina V. Boyko, Erin A. Rosenkranz, Derrick M. Smith, Heather L. Miears, Melissa Oueld es cheikh, Micah Z. Lund, Jeffery C. Young, Patrick N. Reardon, Mark Okon, Serge L. Smirnov, John M. Antos

published 28 Oct 2021

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Development of EST-SSR markers based on transcriptome and its validation in ginger (Zingiber officinale Rosc.)

Venugopal Vidya, Duraisamy Prasath, Mohandas Snigdha, Ramasamy Gobu, Charles Sona, Chandan Suravi Maiti

published 27 Oct 2021

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A bioinformatics pipeline for Mycobacterium tuberculosis sequencing that cleans contaminant reads from sputum samples

Betzaida Cuevas-Córdoba, Cristóbal Fresno, Joshua I. Haase-Hernández, Martín Barbosa-Amezcua, Minerva Mata-Rocha, Marcela Muñoz-Torrico, Miguel A. Salazar-Lezama, José A. Martínez-Orozco, Luis A. Narváez-Díaz, Jorge Salas-Hernández, Vanessa González-Covarrubias, Xavier Soberón

published 26 Oct 2021

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The GH19 Engineering Database: Sequence diversity, substrate scope, and evolution in glycoside hydrolase family 19

Marco Orlando, Patrick C. F. Buchholz, Marina Lotti, Jürgen Pleiss

published 26 Oct 2021

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Single nucleotide polymorphisms and copy-number variations in the Trypanosoma brucei repeat (TBR) sequence can be used to enhance amplification and genotyping of Trypanozoon strains

Nick Van Reet, Pati Patient Pyana, Sara Dehou, Nicolas Bebronne, Stijn Deborggraeve, Philippe Büscher

published 25 Oct 2021

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Comprehensive mutagenesis to identify amino acid residues contributing to the difference in thermostability between two originally thermostable ancestral proteins

Satoshi Akanuma, Minako Yamaguchi, Akihiko Yamagishi

published 21 Oct 2021

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Genome-wide identification, structural and gene expression analysis of the nitrate transporters (NRTs) family in potato (Solanum tuberosum L.)

Jingying Zhang, Zhijun Han, Yue Lu, Yanfei Zhao, Yaping Wang, Jiayue Zhang, Haoran Ma, Yu Zhu Han

published 21 Oct 2021

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Expanding the clinical phenotype associated with NIPAL4 mutation: Study of a Tunisian consanguineous family with erythrokeratodermia variabilis—Like Autosomal Recessive Congenital Ichthyosis

Cherine Charfeddine, Nadia Laroussi, Rahma Mkaouar, Raja Jouini, Olfa Khayat, Aladin Redissi, Amor Mosbah, Hamza Dallali, Achraf Chedly Debbiche, Anissa Zaouak, Sami Fenniche, Sonia Abdelhak, Houda Hammami-Ghorbel

published 20 Oct 2021

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Qualitative lysine crotonylome analysis in the ovarian tissue of Harmonia axyridis (Pallas)

Changying Zheng, Lijuan Sun

published 18 Oct 2021

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Predicting drug targets by homology modelling of Pseudomonas aeruginosa proteins of unknown function

Nikolina Babic, Filip Kovacic

published 14 Oct 2021

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Diversity of fungal pathogens associated with loquat and development of novel virulence scales

Muhammad Fahim Abbas, Sana Batool, Sobia Khaliq, Sidra Mubeen, Azziz-ud-Din, Naseeb Ullah, Khalida Zafar, Muhammad Rafiq, Abdullah M. Al-Sadi, Saqer S. Alotaibi, Ahmed M. El-Shehawi, Yunzhou Li, Ali Tan Kee Zuan, Mohammad Javed Ansari

published 14 Oct 2021

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Predicting PY motif-mediated protein-protein interactions in the Nedd4 family of ubiquitin ligases

A. Katherine Hatstat, Michael D. Pupi, Dewey G. McCafferty

published 12 Oct 2021

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