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Sequence analysis

Conservation Patterns of HIV-1 RT Connection and RNase H Domains: Identification of New Mutations in NRTI-Treated Patients

André F. A. Santos, Renan B. Lengruber, Esmeralda A. Soares, Abhay Jere, Eduardo Sprinz, Ana M. B. Martinez, Jussara Silveira, Fernando S. Sion, Vinay K. Pathak, Marcelo A. Soares

published 12 Mar 2008

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Origin and Evolution of GALA-LRR, a New Member of the CC-LRR Subfamily: From Plants to Bacteria?

Andrey V. Kajava, Maria Anisimova, Nemo Peeters

published 27 Feb 2008

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Recombination and Population Mosaic of a Multifunctional Viral Gene, Adeno-Associated Virus cap

Yasuhiro Takeuchi, Richard Myers, Olivier Danos

published 20 Feb 2008

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Sequence Evidence in the Archaeal Genomes that tRNAs Emerged Through the Combination of Ancestral Genes as 5′ and 3′ tRNA Halves

Kosuke Fujishima, Junichi Sugahara, Masaru Tomita, Akio Kanai

published 20 Feb 2008

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A Three-Stage Colonization Model for the Peopling of the Americas

Andrew Kitchen, Michael M. Miyamoto, Connie J. Mulligan

published 13 Feb 2008

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Accumulating Variation at Conserved Sites in Potyvirus Genomes Is Driven by Species Discovery and Affects Degenerate Primer Design

Linda Zheng, Paul J. Wayper, Adrian J. Gibbs, Mathieu Fourment, Brendan C. Rodoni, Mark J. Gibbs

published 13 Feb 2008

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Predicted Functional RNAs within Coding Regions Constrain Evolutionary Rates of Yeast Proteins

Charles D. Warden, Seong-Ho Kim, Soojin V. Yi

published 13 Feb 2008

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An Update on MyoD Evolution in Teleosts and a Proposed Consensus Nomenclature to Accommodate the Tetraploidization of Different Vertebrate Genomes

Daniel J. Macqueen, Ian A. Johnston

published 06 Feb 2008

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The Plasmodium Export Element Revisited

Jan Alexander Hiss, Jude Marek Przyborski, Florian Schwarte, Klaus Lingelbach, Gisbert Schneider

published 06 Feb 2008

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Natural Selection and Adaptive Evolution of Leptin in the Ochotona Family Driven by the Cold Environmental Stress

Jie Yang, Zhen Long Wang, Xin Quan Zhao, De Peng Wang, De Lin Qi, Bao Hong Xu, Yong Hong Ren, Hui Fang Tian

published 23 Jan 2008

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The Sorcerer II Global Ocean Sampling Expedition: Metagenomic Characterization of Viruses within Aquatic Microbial Samples

Shannon J. Williamson, Douglas B. Rusch, Shibu Yooseph, Aaron L. Halpern, Karla B. Heidelberg, John I. Glass, Cynthia Andrews-Pfannkoch, Douglas Fadrosh, Christopher S. Miller, Granger Sutton, Marvin Frazier, J. Craig Venter

published 23 Jan 2008

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Polyploidization as a Retraction Force in Plant Genome Evolution: Sequence Rearrangements in Triticale

Miguel Bento, H. Sofia Pereira, Margarida Rocheta, Perry Gustafson, Wanda Viegas, Manuela Silva

published 02 Jan 2008

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A High Quality Draft Consensus Sequence of the Genome of a Heterozygous Grapevine Variety

Riccardo Velasco, Andrey Zharkikh, Michela Troggio, Dustin A. Cartwright, Alessandro Cestaro, Dmitry Pruss, Massimo Pindo, Lisa M. FitzGerald, Silvia Vezzulli, Julia Reid, Giulia Malacarne, Diana Iliev, Giuseppina Coppola, Bryan Wardell, Diego Micheletti, Teresita Macalma, Marco Facci, Jeff T. Mitchell, Michele Perazzolli, Glenn Eldredge, Pamela Gatto, Rozan Oyzerski, Marco Moretto, Natalia Gutin, Marco Stefanini, Yang Chen, Cinzia Segala, Christine Davenport, Lorenzo Demattè, Amy Mraz, Juri Battilana, Keith Stormo, Fabrizio Costa, Quanzhou Tao, Azeddine Si-Ammour, Tim Harkins, Angie Lackey, Clotilde Perbost, Bruce Taillon, Alessandra Stella, Victor Solovyev, Jeffrey A. Fawcett, Lieven Sterck, Klaas Vandepoele, Stella M. Grando, Stefano Toppo, Claudio Moser, Jerry Lanchbury, Robert Bogden, Mark Skolnick, Vittorio Sgaramella, Satish K. Bhatnagar, Paolo Fontana, Alexander Gutin, Yves Van de Peer, Francesco Salamini, Roberto Viola

published 19 Dec 2007

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