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Sequence analysis

Rapid Annotation of Anonymous Sequences from Genome Projects Using Semantic Similarities and a Weighting Scheme in Gene Ontology

Paolo Fontana, Alessandro Cestaro, Riccardo Velasco, Elide Formentin, Stefano Toppo

published 27 Feb 2009

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Transcription Factor Binding Sites Are Genetic Determinants of Retroviral Integration in the Human Genome

Barbara Felice, Claudia Cattoglio, Davide Cittaro, Anna Testa, Annarita Miccio, Giuliana Ferrari, Lucilla Luzi, Alessandra Recchia, Fulvio Mavilio

published 24 Feb 2009

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Are Protein Domains Modules of Lateral Genetic Transfer?

Cheong Xin Chan, Aaron E. Darling, Robert G. Beiko, Mark A. Ragan

published 20 Feb 2009

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Two Chromogranin A-Derived Peptides Induce Calcium Entry in Human Neutrophils by Calmodulin-Regulated Calcium Independent Phospholipase A₂

Dan Zhang, Peiman Shooshtarizadeh, Benoît-Joseph Laventie, Didier André Colin, Jean-François Chich, Jasmina Vidic, Jean de Barry, Sylvette Chasserot-Golaz, François Delalande, Alain Van Dorsselaer, Francis Schneider, Karen Helle, Dominique Aunis, Gilles Prévost, Marie-Hélène Metz-Boutigue

published 19 Feb 2009

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Evidence for Co-Evolution between Human MicroRNAs and Alu-Repeats

Stefan Lehnert, Peter Van Loo, Pushpike J. Thilakarathne, Peter Marynen, Geert Verbeke, Frans C. Schuit

published 11 Feb 2009

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Improved Disorder Prediction by Combination of Orthogonal Approaches

Avner Schlessinger, Marco Punta, Guy Yachdav, Laszlo Kajan, Burkhard Rost

published 11 Feb 2009

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Genome-Wide Analyses of Recombination Prone Regions Predict Role of DNA Structural Motif in Recombination

Prithvi Mani, Vinod Kumar Yadav, Swapan Kumar Das, Shantanu Chowdhury

published 09 Feb 2009

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The Tree versus the Forest: The Fungal Tree of Life and the Topological Diversity within the Yeast Phylome

Marina Marcet-Houben, Toni Gabaldón

published 03 Feb 2009

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Using Sequence Similarity Networks for Visualization of Relationships Across Diverse Protein Superfamilies

Holly J. Atkinson, John H. Morris, Thomas E. Ferrin, Patricia C. Babbitt

published 03 Feb 2009

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Consistency Analysis of Redundant Probe Sets on Affymetrix Three-Prime Expression Arrays and Applications to Differential mRNA Processing

Xiangqin Cui, Ann E. Loraine

published 23 Jan 2009

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Novel Exon of Mammalian ADAR2 Extends Open Reading Frame

Stefan Maas, Willemijn M. Gommans

published 19 Jan 2009

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Structural Model of the Rev Regulatory Protein from Equine Infectious Anemia Virus

Yungok Ihm, Wendy O. Sparks, Jae-Hyung Lee, Haibo Cao, Susan Carpenter, Cai-Zhuang Wang, Kai-Ming Ho, Drena Dobbs

published 12 Jan 2009

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Direct Inhibition of GSK3β by the Phosphorylated Cytoplasmic Domain of LRP6 in Wnt/β-Catenin Signaling

Shunfu Piao, Sun-Hye Lee, Hyunjoon Kim, Soohwan Yum, Jennifer L. Stamos, Yongbin Xu, Su-Jin Lee, Jaewon Lee, Sangtaek Oh, Jin-Kwan Han, Bum-Joon Park, William I. Weis, Nam-Chul Ha

published 24 Dec 2008

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