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Sequence analysis

Inferring Condition-Specific Modulation of Transcription Factor Activity in Yeast through Regulon-Based Analysis of Genomewide Expression

André Boorsma, Xiang-Jun Lu, Anna Zakrzewska, Frans M. Klis, Harmen J. Bussemaker

published 03 Sep 2008

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Small Deletion Variants Have Stable Breakpoints Commonly Associated with Alu Elements

Adam J. de Smith, Robin G. Walters, Lachlan J. M. Coin, Israel Steinfeld, Zohar Yakhini, Rob Sladek, Philippe Froguel, Alexandra I. F. Blakemore

published 29 Aug 2008

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Longer First Introns Are a General Property of Eukaryotic Gene Structure

Keith R. Bradnam, Ian Korf

published 29 Aug 2008

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A Translation Initiation Element Specific to mRNAs with Very Short 5′UTR that Also Regulates Transcription

Rofa Elfakess, Rivka Dikstein

published 28 Aug 2008

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Horizontal Gene Transfers Link a Human MRSA Pathogen to Contagious Bovine Mastitis Bacteria

Thomas Brody, Amarendra S. Yavatkar, Yong Lin, Jermaine Ross, Alexander Kuzin, Mukta Kundu, Yang Fann, Ward F. Odenwald

published 27 Aug 2008

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Bioactive Endophytes Warrant Intensified Exploration and Conservation

Stephen A. Smith, David C. Tank, Lori-Ann Boulanger, Carol A. Bascom-Slack, Kaury Eisenman, David Kingery, Beatrice Babbs, Kathleen Fenn, Joshua S. Greene, Bradley D. Hann, Jocelyn Keehner, Elizabeth G. Kelley-Swift, Vivek Kembaiyan, Sun Jin Lee, Puyao Li, David Y. Light, Emily H. Lin, Cong Ma, Emily Moore, Michelle A. Schorn, Daniel Vekhter, Percy V. Nunez, Gary A. Strobel, Michael J. Donoghue, Scott A. Strobel

published 25 Aug 2008

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Detection of Large Numbers of Novel Sequences in the Metatranscriptomes of Complex Marine Microbial Communities

Jack A. Gilbert, Dawn Field, Ying Huang, Rob Edwards, Weizhong Li, Paul Gilna, Ian Joint

published 22 Aug 2008

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Relaxation of Selective Constraints Causes Independent Selenoprotein Extinction in Insect Genomes

Charles E. Chapple, Roderic Guigó

published 13 Aug 2008

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Comparative Metagenomics Reveals Host Specific Metavirulomes and Horizontal Gene Transfer Elements in the Chicken Cecum Microbiome

Ani Qu, Jennifer M. Brulc, Melissa K. Wilson, Bibiana F. Law, James R. Theoret, Lynn A. Joens, Michael E. Konkel, Florent Angly, Elizabeth A. Dinsdale, Robert A. Edwards, Karen E. Nelson, Bryan A. White

published 13 Aug 2008

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The Role of bZIP Transcription Factors in Green Plant Evolution: Adaptive Features Emerging from Four Founder Genes

Luiz Gustavo Guedes Corrêa, Diego Mauricio Riaño-Pachón, Carlos Guerra Schrago, Renato Vicentini dos Santos, Bernd Mueller-Roeber, Michel Vincentz

published 13 Aug 2008

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Transthyretin Protects against A-Beta Peptide Toxicity by Proteolytic Cleavage of the Peptide: A Mechanism Sensitive to the Kunitz Protease Inhibitor

Rita Costa, Frederico Ferreira-da-Silva, Maria J. Saraiva, Isabel Cardoso

published 06 Aug 2008

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Evolutionary Origins and Functions of the Carotenoid Biosynthetic Pathway in Marine Diatoms

Sacha Coesel, Miroslav Oborník, Joao Varela, Angela Falciatore, Chris Bowler

published 06 Aug 2008

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Preservation of Genes Involved in Sterol Metabolism in Cholesterol Auxotrophs: Facts and Hypotheses

Giovanna Vinci, Xuhua Xia, Reiner A. Veitia

published 06 Aug 2008

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