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Sequence analysis

SH3 Domain-Peptide Binding Energy Calculations Based on Structural Ensemble and Multiple Peptide Templates

Seungpyo Hong, Taesu Chung, Dongsup Kim

Classification of Protein Kinases on the Basis of Both Kinase and Non-Kinase Regions

Juliette Martin, Krishanpal Anamika, Narayanaswamy Srinivasan

A Score of the Ability of a Three-Dimensional Protein Model to Retrieve Its Own Sequence as a Quantitative Measure of Its Quality and Appropriateness

León P. Martínez-Castilla, Rogelio Rodríguez-Sotres

Identification and Expression of the Family of Classical Protein-Tyrosine Phosphatases in Zebrafish

Mark van Eekelen, John Overvoorde, Carina van Rooijen, Jeroen den Hertog

The Distribution of GYR- and YLP-Like Motifs in Drosophila Suggests a General Role in Cuticle Assembly and Other Protein-Protein Interactions

R. Scott Cornman

Comparative Analysis of Plasmids in the Genus Listeria

Carsten Kuenne, Sonja Voget, [ ... ], Trinad Chakraborty

Prediction of Nucleosome Positioning Based on Transcription Factor Binding Sites

Xianfu Yi, Yu-Dong Cai, [ ... ], Xiangyin Kong

Cheminformatics-Based Drug Design Approach for Identification of Inhibitors Targeting the Characteristic Residues of MMP-13 Hemopexin Domain

Roopa Kothapalli, Asif M. Khan, [ ... ], Loganath Annamalai

Identification of cis-Regulatory Elements in the Mammalian Genome: The cREMaG Database

Marcin Piechota, Michal Korostynski, Ryszard Przewlocki

Gut Microbial Gene Expression in Mother-Fed and Formula-Fed Piglets

Valeriy Poroyko, James Robert White, [ ... ], Michael J. Morowitz

PeakRegressor Identifies Composite Sequence Motifs Responsible for STAT1 Binding Sites and Their Potential rSNPs

Jean-François Pessiot, Hirokazu Chiba, [ ... ], Wataru Fujibuchi

Host Range and Specificity of the Drosophila C Virus

Martin Kapun, Viola Nolte, Thomas Flatt, Christian Schlötterer

Genomic Characterization of Campylobacter jejuni Strain M1

Carsten Friis, Trudy M. Wassenaar, [ ... ], David W. Ussery

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