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Sequence analysis

Targeted Assembly of Short Sequence Reads

René L. Warren, Robert A. Holt

published 11 May 2011

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Lack of Phylogeographic Structure in the Freshwater Cyanobacterium Microcystis aeruginosa Suggests Global Dispersal

Ineke van Gremberghe, Frederik Leliaert, Joachim Mergeay, Pieter Vanormelingen, Katleen Van der Gucht, Ann-Eline Debeer, Gissell Lacerot, Luc De Meester, Wim Vyverman

published 05 May 2011

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A Bioinformatics Approach to the Structure, Function, and Evolution of the Nucleoprotein of the Order Mononegavirales

Sean B. Cleveland, John Davies, Marcella A. McClure

published 03 May 2011

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Calpain Cleavage Prediction Using Multiple Kernel Learning

David A. duVerle, Yasuko Ono, Hiroyuki Sorimachi, Hiroshi Mamitsuka

published 03 May 2011

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Zinc Finger Recombinases with Adaptable DNA Sequence Specificity

Chris Proudfoot, Arlene L. McPherson, Andreas F. Kolb, W. Marshall Stark

published 29 Apr 2011

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Age- and Disease-Dependent HERV-W Envelope Allelic Variation in Brain: Association with Neuroimmune Gene Expression

Rakesh K. Bhat, Kristofor K. Ellestad, B. Matt Wheatley, Rene Warren, Robert A. Holt, Christopher Power

published 29 Apr 2011

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Conservation of Complex Nuclear Localization Signals Utilizing Classical and Non-Classical Nuclear Import Pathways in LANA Homologs of KSHV and RFHV

Lidia Cherezova, Kellie L. Burnside, Timothy M. Rose

published 29 Apr 2011

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Tensor Decomposition Reveals Concurrent Evolutionary Convergences and Divergences and Correlations with Structural Motifs in Ribosomal RNA

Chaitanya Muralidhara, Andrew M. Gross, Robin R. Gutell, Orly Alter

published 29 Apr 2011

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Evolution of the Karyopherin-β Family of Nucleocytoplasmic Transport Factors; Ancient Origins and Continued Specialization

Amanda J. O'Reilly, Joel B. Dacks, Mark C. Field

published 27 Apr 2011

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Representative Proteomes: A Stable, Scalable and Unbiased Proteome Set for Sequence Analysis and Functional Annotation

Chuming Chen, Darren A. Natale, Robert D. Finn, Hongzhan Huang, Jian Zhang, Cathy H. Wu, Raja Mazumder

published 27 Apr 2011

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Ribosome-Dependent ATPase Interacts with Conserved Membrane Protein in Escherichia coli to Modulate Protein Synthesis and Oxidative Phosphorylation

Mohan Babu, Hiroyuki Aoki, Wasimul Q. Chowdhury, Alla Gagarinova, Chris Graham, Sadhna Phanse, Ben Laliberte, Noor Sunba, Matthew Jessulat, Ashkan Golshani, Andrew Emili, Jack F. Greenblatt, M. Clelia Ganoza

published 27 Apr 2011

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PTB Domain-Directed Substrate Targeting in a Tyrosine Kinase from the Unicellular Choanoflagellate Monosiga brevicollis

Victoria Prieto-Echagüe, Perry M. Chan, Barbara P. Craddock, Edward Manser, W. Todd Miller

published 26 Apr 2011

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jMOTU and Taxonerator: Turning DNA Barcode Sequences into Annotated Operational Taxonomic Units

Martin Jones, Anisah Ghoorah, Mark Blaxter

published 25 Apr 2011

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