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Sequence analysis

Sequence- and Interactome-Based Prediction of Viral Protein Hotspots Targeting Host Proteins: A Case Study for HIV Nef

Mahdi Sarmady, William Dampier, Aydin Tozeren

A Minimum of Three Motifs Is Essential for Optimal Binding of Pseudomurein Cell Wall-Binding Domain of Methanothermobacter thermautotrophicus

Ganesh Ram R. Visweswaran, Bauke W. Dijkstra, Jan Kok

Transcriptome Sequencing and De Novo Analysis for Yesso Scallop (Patinopecten yessoensis) Using 454 GS FLX

Rui Hou, Zhenmin Bao, [ ... ], Xiaoli Hu

Evolutionary Analysis of Novel Serine Proteases in the Venom Gland Transcriptome of Bitis gabonica rhinoceros

Sakthivel Vaiyapuri, Simon C. Wagstaff, [ ... ], E. Gail Hutchinson

New Structural and Functional Contexts of the Dx[DN]xDG Linear Motif: Insights into Evolution of Calcium-Binding Proteins

Daniel J. Rigden, Duncan D. Woodhead, Prudence W. H. Wong, Michael Y. Galperin

Improved Phylogenetic Analyses Corroborate a Plausible Position of Martialis heureka in the Ant Tree of Life

Patrick Kück, Francisco Hita Garcia, Bernhard Misof, Karen Meusemann

Identification of a Classical Bipartite Nuclear Localization Signal in the Drosophila TEA/ATTS Protein Scalloped

Adam C. Magico, John B. Bell

Sequence Imputation of HPV16 Genomes for Genetic Association Studies

Benjamin Smith, Zigui Chen, [ ... ], Robert D. Burk

Genome Assembly Has a Major Impact on Gene Content: A Comparison of Annotation in Two Bos Taurus Assemblies

Liliana Florea, Alexander Souvorov, Theodore S. Kalbfleisch, Steven L. Salzberg

The First Insight into the Tissue Specific Taxus Transcriptome via Illumina Second Generation Sequencing

Da Cheng Hao, GuangBo Ge, [ ... ], Ling Yang

Poly (A)⁺ Transcriptome Assessment of ERBB2-Induced Alterations in Breast Cell Lines

Dirce Maria Carraro, Elisa Napolitano Ferreira, [ ... ], Ricardo Renzo Brentani

The Utility of High-Resolution Melting Analysis of SNP Nucleated PCR Amplicons—An MLST Based Staphylococcus aureus Typing Scheme

Rachael A. Lilliebridge, Steven Y.C. Tong, Philip M. Giffard, Deborah C. Holt

Genome-Wide Distribution and Organization of Microsatellites in Plants: An Insight into Marker Development in Brachypodium

Humira Sonah, Rupesh K. Deshmukh, [ ... ], Tilak R. Sharma

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