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Sequence analysis

Insights from a workplace SARS-CoV-2 specimen collection program, with genomes placed into global sequence phylogeny

Owen P. Leiser, Deanna L. Auberry, Erica Bakker, Will Chrisler, Kristin Engbrecht, Heather Engelmann, Sarah Fansler, Vincent Gerbasi, Joshua Hansen, Chelsea Hutchinson, Janine Hutchison, Mary J. Lancaster, Kathleen Lawrence, Angela Melville, Jennifer Mobberley, Isabelle O’Bryon, Kristie L. Oxford, Tessa Oxford, Shelby Phillips, Kabrena E. Rodda, James A. Sanford, Athena Schepmoes, Brian E. Staley, Kelcey Terrell, Kristin Victry, Cynthia Warner, Kristin M. Omberg

published 28 Apr 2023

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Oxylipin biosynthetic gene families of Cannabis sativa

Eli J. Borrego, Mariah Robertson, James Taylor, Zachary Schultzhaus, Elida M. Espinoza

published 26 Apr 2023

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Potential contribution of Helicobacter pylori proteins in the pathogenesis of type 1 gastric neuroendocrine tumor and urticaria. In silico approach

Andrés Sánchez Caraballo, Yenny Guzmán, Jorge Sánchez, Marlon Munera, Elizabeth Garcia, Deyanira Gonzalez-Devia

published 25 Apr 2023

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Taxonomic identification accuracy from BOLD and GenBank databases using over a thousand insect DNA barcodes from Colombia

Nathalie Baena-Bejarano, Catalina Reina, Diego Esteban Martínez-Revelo, Claudia A. Medina, Eduardo Tovar, Sandra Uribe-Soto, Jhon Cesar Neita-Moreno, Mailyn A. Gonzalez

published 24 Apr 2023

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Obscurin Rho GEF domains are phosphorylated by MST-family kinases but do not exhibit nucleotide exchange factor activity towards Rho GTPases in vitro

Daniel Koch, Ay Lin Kho, Atsushi Fukuzawa, Alexander Alexandrovich, Kutti J. Vanaanen, Andrew Beavil, Mark Pfuhl, Martin Rees, Mathias Gautel

published 20 Apr 2023

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Genome-wide analyses of LATERAL ORGAN BOUNDARIES in cassava reveal the role of LBD47 in defence against bacterial blight

Yiming Mao, Assane Hamidou Abdoulaye, Jiming Song, Xiaowen Yao, Yijie Zhang, Yu Gao, Yiwei Ye, Kai Luo, Wei Xia, Yinhua Chen

published 20 Apr 2023

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A comprehensive performance analysis of sequence-based within-sample testing NIPT methods

Tom Mokveld, Zaid Al-Ars, Erik A. Sistermans, Marcel Reinders

published 14 Apr 2023

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Designed and validated novel allele-specific primer to differentiate Kernel Row Number (KRN) in tropical field corn

Ganapati Mukri, Kumari Shilpa, R. N. Gadag, Jayant S. Bhat, Chandu Singh, Navin C. Gupta, Chandra Prabha, Sahana Police Patil

published 12 Apr 2023

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Characterizing nrDNA ITS1, 5.8S and ITS2 secondary structures and their phylogenetic utility in the legume tribe Hedysareae with special reference to Hedysarum

Haniyeh Nafisi, Akram Kaveh, Shahrokh Kazempour-Osaloo

published 12 Apr 2023

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Immunoglobulin profiling with large high-density peptide microarrays as screening method to detect candidate proteins for future biomarker detection in dogs with steroid-responsive meningitis-arteritis

Jasmin Nicole Nessler, Andrea Tipold

published 10 Apr 2023

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Molecular characterization of human respiratory syncytial virus in Seoul, South Korea, during 10 consecutive years, 2010–2019

Ha Nui Kim, Jinha Hwang, Soo-Young Yoon, Chae Seung Lim, Yunjung Cho, Chang-Kyu Lee, Myung-Hyun Nam

published 06 Apr 2023

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Identification of GC-rich LAT genes in birds

Sarka Janusova, Veronika Krchlikova, Tomas Hron, Daniel Elleder, Ondrej Stepanek

published 06 Apr 2023

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Demystifying Cassiopea species identity in the Florida Keys: Cassiopea xamachana and Cassiopea andromeda coexist in shallow waters

Kaden Muffett, Maria Pia Miglietta

published 29 Mar 2023

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