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Sequence analysis

Exploiting Gene Families for Phylogenomic Analysis of Myzostomid Transcriptome Data

Stefanie Hartmann, Conrad Helm, Birgit Nickel, Matthias Meyer, Torsten H. Struck, Ralph Tiedemann, Joachim Selbig, Christoph Bleidorn

published 20 Jan 2012

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Analysis of the Key Elements of FFAT-Like Motifs Identifies New Proteins That Potentially Bind VAP on the ER, Including Two AKAPs and FAPP2

Veronika Mikitova, Timothy P. Levine

published 19 Jan 2012

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Comparative Metaproteomics and Diversity Analysis of Human Intestinal Microbiota Testifies for Its Temporal Stability and Expression of Core Functions

Carolin A. Kolmeder, Mark de Been, Janne Nikkilä, Ilja Ritamo, Jaana Mättö, Leena Valmu, Jarkko Salojärvi, Airi Palva, Anne Salonen, Willem M. de Vos

published 18 Jan 2012

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DNA Barcoding of Recently Diverged Species: Relative Performance of Matching Methods

Robin van Velzen, Emanuel Weitschek, Giovanni Felici, Freek T. Bakker

published 17 Jan 2012

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Soft Coral Sarcophyton (Cnidaria: Anthozoa: Octocorallia) Species Diversity and Chemotypes

Satoe Aratake, Tomohiko Tomura, Seikoh Saitoh, Ryouma Yokokura, Yuichi Kawanishi, Ryuichi Shinjo, James Davis Reimer, Junichi Tanaka, Hideaki Maekawa

published 17 Jan 2012

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Whole Genomes of Chandipura Virus Isolates and Comparative Analysis with Other Rhabdoviruses

Sarah S. Cherian, Rashmi S. Gunjikar, Arpita Banerjee, Satyendra Kumar, Vidya A. Arankalle

published 17 Jan 2012

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Accounting For Alignment Uncertainty in Phylogenomics

Martin Wu, Sourav Chatterji, Jonathan A. Eisen

published 17 Jan 2012

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Genome-Wide Progesterone Receptor Binding: Cell Type-Specific and Shared Mechanisms in T47D Breast Cancer Cells and Primary Leiomyoma Cells

Ping Yin, Damian Roqueiro, Lei Huang, Jonas K. Owen, Anna Xie, Antonia Navarro, Diana Monsivais, John S. Coon V, J. Julie Kim, Yang Dai, Serdar E. Bulun

published 17 Jan 2012

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Rapid Plant Identification Using Species- and Group-Specific Primers Targeting Chloroplast DNA

Corinna Wallinger, Anita Juen, Karin Staudacher, Nikolaus Schallhart, Evi Mitterrutzner, Eva-Maria Steiner, Bettina Thalinger, Michael Traugott

published 12 Jan 2012

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Two-Stage Clustering (TSC): A Pipeline for Selecting Operational Taxonomic Units for the High-Throughput Sequencing of PCR Amplicons

Xiao-Tao Jiang, Hai Zhang, Hua-Fang Sheng, Yu Wang, Yan He, Fei Zou, Hong-Wei Zhou

published 11 Jan 2012

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Region Specific and Worldwide Distribution of Collagen-Binding M Proteins with PARF Motifs among Human Pathogenic Streptococcal Isolates

Silvana Reißmann, Christine M. Gillen, Marcus Fulde, René Bergmann, Andreas Nerlich, Reena Rajkumari, Kootallur N. Brahmadathan, Gursharan S. Chhatwal, D. Patric Nitsche-Schmitz

published 11 Jan 2012

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Development of a DNA Barcoding System for Seagrasses: Successful but Not Simple

Christina Lucas, Thirunavakkarasu Thangaradjou, Jutta Papenbrock

published 11 Jan 2012

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Armadillo 1.1: An Original Workflow Platform for Designing and Conducting Phylogenetic Analysis and Simulations

Etienne Lord, Mickael Leclercq, Alix Boc, Abdoulaye Baniré Diallo, Vladimir Makarenkov

published 11 Jan 2012

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