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Sequence analysis

GraphTS: Graph-represented time series for subsequence anomaly detection

Roozbeh Zarei, Guangyan Huang, Junfeng Wu

published 16 Aug 2023

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Abundance and prevalence of ESBL coding genes in patients undergoing first line eradication therapy for Helicobacter pylori

Dita Gudra, Ivars Silamikelis, Janis Pjalkovskis, Ilva Danenberga, Darta Pupola, Girts Skenders, Maija Ustinova, Kaspars Megnis, Marcis Leja, Reinis Vangravs, Davids Fridmanis

published 10 Aug 2023

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Analytical sameness methodology for the evaluation of structural, physicochemical, and biological characteristics of Armlupeg: A pegfilgrastim biosimilar case study

Arati Deshmukh, Rishank Goyal, Kalyana Sundaram, Kaustubh Dange, Tejshri Lakhote, Sanjay Niranjan, Jennifer Bharucha, Ashok Mishra, Bhavesh Vats, Sanjay Tiwari

published 09 Aug 2023

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Exploring the evolution and function of Canoe’s intrinsically disordered region in linking cell-cell junctions to the cytoskeleton during embryonic morphogenesis

Noah J. Gurley, Rachel A. Szymanski, Robert H. Dowen, T. Amber Butcher, Noboru Ishiyama, Mark Peifer

published 03 Aug 2023

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Evaluation of an optimized germline exomes pipeline using BWA-MEM2 and Dragen-GATK tools

Nofe Alganmi, Heba Abusamra

published 03 Aug 2023

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Analysis of gene duplication within the Arabidopsis NUCLEAR FACTOR Y, subunit B (NF-YB) protein family reveals domains under both purifying and diversifying selection

Chamindika L. Siriwardana, Jan R. Risinger, Emily Mills Carpenter, Ben F. Holt III

published 02 Aug 2023

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Development of EST-SSRs based on the transcriptome of Castanopsis carlesii and cross-species transferability in other Castanopsis species

Xiaoru Zhong, Mengyang Xu, Ting Li, Rongxi Sun

published 20 Jul 2023

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STRategy: A support system for collecting and analyzing next-generation sequencing data of short tandem repeats for forensic science

Nuttachai Kulthammanit, Tikumphorn Sathirapatya, Poonyapat Sukawutthiya, Hasnee Noh, Kornkiat Vongpaisarnsin, Duangdao Wichadakul

published 17 Jul 2023

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The difficulty of aligning intrinsically disordered protein sequences as assessed by conservation and phylogeny

Andrew C. Riley, Daniel A. Ashlock, Steffen P. Graether

published 13 Jul 2023

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On closing the inopportune gap with consistency transformation and iterative refinement

Mario João Jr., Alexandre C. Sena, Vinod E. F. Rebello

published 13 Jul 2023

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A unique single nucleotide polymorphism in Agouti Signalling Protein (ASIP) gene changes coat colour of Sri Lankan leopard (Panthera pardus kotiya) to dark black

M. G. C. Sooriyabandara, A. U. Bandaranayake, H. A. B. M. Hathurusinghe, S. M. Jayasundara, M. S. R. R. P. Marasinghe, G. A. T. Prasad, V. P. M. K. Abeywardana, M. A. Pinidiya, R. M. R. Nilanthi, P. C. G. Bandaranayake

published 13 Jul 2023

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Comparative study of multiple approaches for identifying cultivable microalgae population diversity from freshwater samples

Amal A. Badr, Walid M. Fouad

published 07 Jul 2023

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Molecular and morphological characterization of Xylaria karsticola (Ascomycota) isolated from the fruiting body of Macrolepiota procera (Basidiomycota) from Bulgaria

Galena Angelova, Petya Stefanova, Mariya Brazkova, Albert Krastanov

published 29 Jun 2023

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