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Sequence analysis

Soil Bacterial Diversity Screening Using Single 16S rRNA Gene V Regions Coupled with Multi-Million Read Generating Sequencing Technologies

Sotirios Vasileiadis, Edoardo Puglisi, [ ... ], Marco Trevisan

Bovine ncRNAs Are Abundant, Primarily Intergenic, Conserved and Associated with Regulatory Genes

Zhipeng Qu, David L. Adelson

Transcriptome Analysis and SSR/SNP Markers Information of the Blunt Snout Bream (Megalobrama amblycephala)

Zexia Gao, Wei Luo, [ ... ], Weimin Wang

Structural and Functional Characterization of Ribosomal Protein Gene Introns in Sponges

Drago Perina, Marina Korolija, [ ... ], Helena Ćetković

Structural Insights into the Assembly of CARMA1 and BCL10

Siwei Li, Xue Yang, Juan Shao, Yuequan Shen

A Novel Approach for Transcription Factor Analysis Using SELEX with High-Throughput Sequencing (TFAST)

Daniel J. Reiss, Frederick M. Howard, Harry L. T. Mobley

Mis-Assembled “Segmental Duplications” in Two Versions of the Bos taurus Genome

Aleksey V. Zimin, David R. Kelley, [ ... ], James A. Yorke

A Comparison of Computational Methods for Identifying Virulence Factors

Lu-Lu Zheng, Yi-Xue Li, [ ... ], Kuo-Chen Chou

Computational Identification of Novel Amino-Acid Interactions in HIV Gag via Correlated Evolution

Olga V. Kalinina, Heike Oberwinkler, [ ... ], John A. G. Briggs

De Novo Sequencing and Transcriptome Analysis of the Central Nervous System of Mollusc Lymnaea stagnalis by Deep RNA Sequencing

Hisayo Sadamoto, Hironobu Takahashi, [ ... ], Yoshinori Asakawa

miRSystem: An Integrated System for Characterizing Enriched Functions and Pathways of MicroRNA Targets

Tzu-Pin Lu, Chien-Yueh Lee, [ ... ], Eric Y. Chuang

A Transgenic Transcription Factor (TaDREB3) in Barley Affects the Expression of MicroRNAs and Other Small Non-Coding RNAs

Michael Hackenberg, Bu-Jun Shi, Perry Gustafson, Peter Langridge

SIMPLEX: Cloud-Enabled Pipeline for the Comprehensive Analysis of Exome Sequencing Data

Maria Fischer, Rene Snajder, [ ... ], Gernot Stocker

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