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Sequence analysis

Mating of the Stichotrichous Ciliate Oxytricha trifallax Induces Production of a Class of 27 nt Small RNAs Derived from the Parental Macronucleus

Alan M. Zahler, Zachary T. Neeb, Athena Lin, Sol Katzman

A Melting Pot of Old World Begomoviruses and Their Satellites Infecting a Collection of Gossypium Species in Pakistan

Muhammad Shah Nawaz-ul-Rehman, Rob W. Briddon, Claude M. Fauquet

SAP—A Sequence Mapping and Analyzing Program for Long Sequence Reads Alignment and Accurate Variants Discovery

Zheng Sun, Weidong Tian

Identification of DNA Binding Motifs of the Mycobacterium tuberculosis PhoP/PhoR Two-Component Signal Transduction System

Mena Cimino, Christophe Thomas, [ ... ], Deshmukh N. Gopaul

Relating the Disease Mutation Spectrum to the Evolution of the Cystic Fibrosis Transmembrane Conductance Regulator (CFTR)

Lavanya Rishishwar, Neha Varghese, [ ... ], Nael A. McCarty

Discovery of Genes Related to Insecticide Resistance in Bactrocera dorsalis by Functional Genomic Analysis of a De Novo Assembled Transcriptome

Ju-Chun Hsu, Ting-Ying Chien, [ ... ], Chien-Yu Chen

The “CPC Clip Motif”: A Conserved Structural Signature for Heparin-Binding Proteins

Marc Torrent, M. Victòria Nogués, David Andreu, Ester Boix

Soil Bacterial Diversity Screening Using Single 16S rRNA Gene V Regions Coupled with Multi-Million Read Generating Sequencing Technologies

Sotirios Vasileiadis, Edoardo Puglisi, [ ... ], Marco Trevisan

Bovine ncRNAs Are Abundant, Primarily Intergenic, Conserved and Associated with Regulatory Genes

Zhipeng Qu, David L. Adelson

Transcriptome Analysis and SSR/SNP Markers Information of the Blunt Snout Bream (Megalobrama amblycephala)

Zexia Gao, Wei Luo, [ ... ], Weimin Wang

Structural and Functional Characterization of Ribosomal Protein Gene Introns in Sponges

Drago Perina, Marina Korolija, [ ... ], Helena Ćetković

Structural Insights into the Assembly of CARMA1 and BCL10

Siwei Li, Xue Yang, Juan Shao, Yuequan Shen

A Novel Approach for Transcription Factor Analysis Using SELEX with High-Throughput Sequencing (TFAST)

Daniel J. Reiss, Frederick M. Howard, Harry L. T. Mobley

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