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Sequence analysis

DNA Barcoding Reveals Cryptic Diversity within Commercially Exploited Indo-Malay Carangidae (Teleosteii: Perciformes)

Tun Nurul Aimi Mat Jaafar, Martin I. Taylor, Siti Azizah Mohd Nor, Mark de Bruyn, Gary R. Carvalho

published 29 Nov 2012

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Molecular Modeling Study on Tunnel Behavior in Different Histone Deacetylase Isoforms

Sundarapandian Thangapandian, Shalini John, Yuno Lee, Venkatesh Arulalapperumal, Keun Woo Lee

published 29 Nov 2012

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The Duplicated Genes Database: Identification and Functional Annotation of Co-Localised Duplicated Genes across Genomes

Marion Ouedraogo, Charles Bettembourg, Anthony Bretaudeau, Olivier Sallou, Christian Diot, Olivier Demeure, Frédéric Lecerf

published 28 Nov 2012

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Desmophyllum dianthus (Esper, 1794) in the Scleractinian Phylogeny and Its Intraspecific Diversity

Anna M. Addamo, James D. Reimer, Marco Taviani, André Freiwald, Annie Machordom

published 28 Nov 2012

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Comprehensive Human Transcription Factor Binding Site Map for Combinatory Binding Motifs Discovery

Arnoldo J. Müller-Molina, Hans R. Schöler, Marcos J. Araúzo-Bravo

published 28 Nov 2012

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Target Motifs Affecting Natural Immunity by a Constitutive CRISPR-Cas System in Escherichia coli

Cristóbal Almendros, Noemí M. Guzmán, César Díez-Villaseñor, Jesús García-Martínez, Francisco J. M. Mojica

published 26 Nov 2012

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Prediction of Protein-Destabilizing Polymorphisms by Manual Curation with Protein Structure

Craig Alan Gough, Keiichi Homma, Yumi Yamaguchi-Kabata, Makoto K. Shimada, Ranajit Chakraborty, Yasuyuki Fujii, Hisakazu Iwama, Shinsei Minoshima, Shigetaka Sakamoto, Yoshiharu Sato, Yoshiyuki Suzuki, Masahito Tada-Umezaki, Ken Nishikawa, Tadashi Imanishi, Takashi Gojobori

published 26 Nov 2012

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De-MetaST-BLAST: A Tool for the Validation of Degenerate Primer Sets and Data Mining of Publicly Available Metagenomes

Christopher A. Gulvik, T. Chad Effler, Steven W. Wilhelm, Alison Buchan

published 26 Nov 2012

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Comparative Genomic and Phylogenetic Approaches to Characterize the Role of Genetic Recombination in Mycobacterial Evolution

Silvia E. Smith, Patrice Showers-Corneli, Caitlin N. Dardenne, Henry H. Harpending, Darren P. Martin, Robert G. Beiko

published 26 Nov 2012

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OTU Analysis Using Metagenomic Shotgun Sequencing Data

Xiaolin Hao, Ting Chen

published 26 Nov 2012

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The Chaperonin-60 Universal Target Is a Barcode for Bacteria That Enables De Novo Assembly of Metagenomic Sequence Data

Matthew G. Links, Tim J. Dumonceaux, Sean M. Hemmingsen, Janet E. Hill

published 26 Nov 2012

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Crystal Structures of Two Transcriptional Regulators from Bacillus cereus Define the Conserved Structural Features of a PadR Subfamily

Guntur Fibriansah, Ákos T. Kovács, Trijntje J. Pool, Mirjam Boonstra, Oscar P. Kuipers, Andy-Mark W. H. Thunnissen

published 26 Nov 2012

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eThread: A Highly Optimized Machine Learning-Based Approach to Meta-Threading and the Modeling of Protein Tertiary Structures

Michal Brylinski, Daswanth Lingam

published 21 Nov 2012

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