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Sequence analysis

DTW4Omics: Comparing Patterns in Biological Time Series

Rachel Cavill, Jos Kleinjans, Jacob-Jan Briedé

published 20 Aug 2013

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Impact of Library Preparation on Downstream Analysis and Interpretation of RNA-Seq Data: Comparison between Illumina PolyA and NuGEN Ovation Protocol

Zhifu Sun, Yan W. Asmann, Asha Nair, Yuji Zhang, Liguo Wang, Krishna R. Kalari, Aditya V. Bhagwate, Tiffany R. Baker, Jennifer M. Carr, Jean-Pierre A. Kocher, Edith A. Perez, E. Aubrey Thompson

published 19 Aug 2013

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The Effect of Primer Choice and Short Read Sequences on the Outcome of 16S rRNA Gene Based Diversity Studies

Jonas Ghyselinck, Stefan Pfeiffer, Kim Heylen, Angela Sessitsch, Paul De Vos

published 19 Aug 2013

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Genome-Wide Relatedness of Treponema pedis, from Gingiva and Necrotic Skin Lesions of Pigs, with the Human Oral Pathogen Treponema denticola

Olov Svartström, Memoona Mushtaq, Märit Pringle, Bo Segerman

published 19 Aug 2013

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De Novo Transcriptome of Brassica juncea Seed Coat and Identification of Genes for the Biosynthesis of Flavonoids

Xianjun Liu, Ying Lu, Yuhui Yuan, Shuyan Liu, Chunyun Guan, Sheyuan Chen, Zhongsong Liu

published 19 Aug 2013

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Evolution and Taxonomic Classification of Alphapapillomavirus 7 Complete Genomes: HPV18, HPV39, HPV45, HPV59, HPV68 and HPV70

Zigui Chen, Mark Schiffman, Rolando Herrero, Rob DeSalle, Kathryn Anastos, Michel Segondy, Vikrant V. Sahasrabuddhe, Patti E. Gravitt, Ann W. Hsing, Robert D. Burk

published 16 Aug 2013

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Identification of Potential Plk1 Targets in a Cell-Cycle Specific Proteome through Structural Dynamics of Kinase and Polo Box-Mediated Interactions

Nousheen Bibi, Zahida Parveen, Sajid Rashid

published 15 Aug 2013

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De Novo Sequencing and Transcriptome Analysis of Wolfiporia cocos to Reveal Genes Related to Biosynthesis of Triterpenoids

Shaohua Shu, Bei Chen, Mengchun Zhou, Xinmei Zhao, Haiyang Xia, Mo Wang

published 14 Aug 2013

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Bacterial Community Development in Experimental Gingivitis

James O. Kistler, Veronica Booth, David J. Bradshaw, William G. Wade

published 14 Aug 2013

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A Comparison of Methods for Clustering 16S rRNA Sequences into OTUs

Wei Chen, Clarence K. Zhang, Yongmei Cheng, Shaowu Zhang, Hongyu Zhao

published 13 Aug 2013

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Novel Extracellular PHB Depolymerase from Streptomyces ascomycinicus: PHB Copolymers Degradation in Acidic Conditions

Javier García-Hidalgo, Daniel Hormigo, Miguel Arroyo, Isabel de la Mata

published 12 Aug 2013

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Direct Detection of Alternative Open Reading Frames Translation Products in Human Significantly Expands the Proteome

Benoît Vanderperre, Jean-François Lucier, Cyntia Bissonnette, Julie Motard, Guillaume Tremblay, Solène Vanderperre, Maxence Wisztorski, Michel Salzet, François-Michel Boisvert, Xavier Roucou

published 12 Aug 2013

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Identification and Characterization of Three Novel Lipases Belonging to Families II and V from Anaerovibrio lipolyticus 5ST

Florence Privé, Naheed N. Kaderbhai, Susan Girdwood, Hilary J. Worgan, Eric Pinloche, Nigel D. Scollan, Sharon A. Huws, C. Jamie Newbold

published 12 Aug 2013

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