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Sequence analysis

Large Scale Identification and Categorization of Protein Sequences Using Structured Logistic Regression

Bjørn P. Pedersen, Georgiana Ifrim, [ ... ], Christian N. S. Pedersen

Phylogenetic and Biological Significance of Evolutionary Elements from Metazoan Mitochondrial Genomes

Jianbo Yuan, Qingming Zhu, Bin Liu

Bioinformatics Analysis of Bacterial Annexins – Putative Ancestral Relatives of Eukaryotic Annexins

Praveen Kumar Kodavali, Małgorzata Dudkiewicz, Sławomir Pikuła, Krzysztof Pawłowski

Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase Cap-Snatching Domains

Delphine Guilligay, Jan Kadlec, [ ... ], Stephen Cusack

Identification of a Novel Haemophilus parasuis-Specific B Cell Epitope Using Monoclonal Antibody against the OppA Protein

Nan Zheng, Zheng Chai, [ ... ], Xi Li

Identification and Chronological Analysis of Genomic Signatures in Influenza A Viruses

Yuh-Jyh Hu, Po-Chin Tu, Chun-Sheng Lin, Szu-Ting Guo

Prediction of Detailed Enzyme Functions and Identification of Specificity Determining Residues by Random Forests

Chioko Nagao, Nozomi Nagano, Kenji Mizuguchi

DNA Barcoding Reveals Limited Accuracy of Identifications Based on Folk Taxonomy

Hugo J. de Boer, Abderrahim Ouarghidi, [ ... ], Anneleen Kool

Performance of Single and Concatenated Sets of Mitochondrial Genes at Inferring Metazoan Relationships Relative to Full Mitogenome Data

Justin C. Havird, Scott R. Santos

Expression of SLC2A9 Isoforms in the Kidney and Their Localization in Polarized Epithelial Cells

Toru Kimura, Michi Takahashi, Kunimasa Yan, Hiroyuki Sakurai

In Silico Prediction and In Vivo Validation of Daphnia pulex Micrornas

Shuai Chen, Garrett J. McKinney, Krista M. Nichols, Maria S. Sepúlveda

Accuracy of MicroRNA Discovery Pipelines in Non-Model Organisms Using Closely Related Species Genomes

Kayvan Etebari, Sassan Asgari

ClassyFlu: Classification of Influenza A Viruses with Discriminatively Trained Profile-HMMs

Sandra Van der Auwera, Ingo Bulla, [ ... ], Mario Stanke

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