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Sequence analysis

Deep RNA Sequencing Reveals Hidden Features and Dynamics of Early Gene Transcription in Paramecium bursaria Chlorella Virus 1

Guillaume Blanc, Michael Mozar, [ ... ], James L. Van Etten

Genetically Engineered Synthetic Miniaturized Versions of Plasmodium falciparum UvrD Helicase Are Catalytically Active

Abulaish Ansari, Mohammed Tarique, Renu Tuteja

Scanning of Transposable Elements and Analyzing Expression of Transposase Genes of Sweet Potato [Ipomoea batatas]

Lang Yan, Ying-Hong Gu, [ ... ], Haiyan Wang

HIV-1 Subtypes B and C Unique Recombinant Forms (URFs) and Transmitted Drug Resistance Identified in the Western Cape Province, South Africa

Graeme Brendon Jacobs, Eduan Wilkinson, [ ... ], Susan Engelbrecht

Where Taxonomy Based on Subtle Morphological Differences Is Perfectly Mirrored by Huge Genetic Distances: DNA Barcoding in Protura (Hexapoda)

Monika Carol Resch, Julia Shrubovych, [ ... ], Günther Pass

PolyaPeak: Detecting Transcription Factor Binding Sites from ChIP-seq Using Peak Shape Information

Hao Wu, Hongkai Ji

Palindromic Sequence Artifacts Generated during Next Generation Sequencing Library Preparation from Historic and Ancient DNA

Bastiaan Star, Alexander J. Nederbragt, [ ... ], Sissel Jentoft

Crystal Structures of the Novel Cytosolic 5′-Nucleotidase IIIB Explain Its Preference for m⁷GMP

Thomas Monecke, Juliane Buschmann, [ ... ], Ralf Ficner

The Bitter Barricading of Prostaglandin Biosynthesis Pathway: Understanding the Molecular Mechanism of Selective Cyclooxygenase-2 Inhibition by Amarogentin, a Secoiridoid Glycoside from Swertia chirayita

Shantanu Shukla, Khushboo Bafna, Durai Sundar, Sunil S. Thorat

Comparison of Illumina and 454 Deep Sequencing in Participants Failing Raltegravir-Based Antiretroviral Therapy

Jonathan Z. Li, Brad Chapman, [ ... ], and the ACTG A5262 Study Team

Analysis of the Skin Transcriptome in Two Oujiang Color Varieties of Common Carp

Chenghui Wang, Michael Wachholtz, [ ... ], Guoqing Lu

MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping

Wan-Ping Lee, Michael P. Stromberg, [ ... ], Gabor T. Marth

Optimal Eukaryotic 18S and Universal 16S/18S Ribosomal RNA Primers and Their Application in a Study of Symbiosis

Yong Wang, Ren Mao Tian, [ ... ], Pei-Yuan Qian

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