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Sequence analysis

Comparative Genome Analysis of Lactobacillus rhamnosus Clinical Isolates from Initial Stages of Dental Pulp Infection: Identification of a New Exopolysaccharide Cluster

Mangala A. Nadkarni, Zhiliang Chen, Marc R. Wilkins, Neil Hunter

Prediction of Steps in the Evolution of Variola Virus Host Range

Chad Smithson, Alex Purdy, Adrian J. Verster, Chris Upton

Sequencing of a Patient with Balanced Chromosome Abnormalities and Neurodevelopmental Disease Identifies Disruption of Multiple High Risk Loci by Structural Variation

Jonathon Blake, Andrew Riddell, [ ... ], Heiko Runz

STEME: A Robust, Accurate Motif Finder for Large Data Sets

John E. Reid, Lorenz Wernisch

Correction of the Caulobacter crescentus NA1000 Genome Annotation

Bert Ely, LaTia Etheredge Scott

A Draft De Novo Genome Assembly for the Northern Bobwhite (Colinus virginianus) Reveals Evidence for a Rapid Decline in Effective Population Size Beginning in the Late Pleistocene

Yvette A. Halley, Scot E. Dowd, [ ... ], Christopher M. Seabury

De Novo Assembly and Annotation of Salvia splendens Transcriptome Using the Illumina Platform

Xiuxiu Ge, Hongwei Chen, [ ... ], Kefeng Liu

Detection of Viral Proteins in Human Cells Lines by Xeno-Proteomics: Elimination of the Last Valid Excuse for Not Testing Every Cellular Proteome Dataset for Viral Proteins

Alexey L. Chernobrovkin, Roman A. Zubarev

Combining Transcriptome Assemblies from Multiple De Novo Assemblers in the Allo-Tetraploid Plant Nicotiana benthamiana

Kenlee Nakasugi, Ross Crowhurst, Julia Bally, Peter Waterhouse

Development and Validation of a Single-Tube Multiple-Locus Variable Number Tandem Repeat Analysis for Klebsiella pneumoniae

Antoinette A. T. P. Brink, Christian J. H. von Wintersdorff, [ ... ], Petra F. G. Wolffs

Redefining the Human Oral Mycobiome with Improved Practices in Amplicon-based Taxonomy: Discovery of Malassezia as a Prominent Commensal

Amanda K. Dupuy, Marika S. David, [ ... ], Linda D. Strausbaugh

Sequencing of Chloroplast Genomes from Wheat, Barley, Rye and Their Relatives Provides a Detailed Insight into the Evolution of the Triticeae Tribe

Christopher P. Middleton, Natacha Senerchia, [ ... ], Benjamin Kilian

Design Rules for Selective Binding of Nuclear Localization Signals to Minor Site of Importin α

Xiaodong Pang, Huan-Xiang Zhou

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