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Sequence analysis

Development of infectious clones of mungbean yellow mosaic India virus (MYMIV, Begomovirus vignaradiataindiaense) infecting mungbean [Vigna radiata (L.) R. Wilczek] and evaluation of a RIL population for MYMIV resistance

Nikki Kumari, Muraleedhar S. Aski, Gyan Prakash Mishra, Anirban Roy, Harsh Kumar Dikshit, Shipra Saxena, Manju Kohli, Bikash Mandal, Subodh Kumar Sinha, Dwijesh Chandra Mishra, Md Firoz Mondal, Ranjeet Ranjan Kumar, Atul Kumar, Ramakrishnan M. Nair

published 22 Oct 2024

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Comparative genomics of Fusarium species causing Fusarium ear rot of maize

Owen Hudson, Colton D. Meinecke, Jeremy T. Brawner

published 18 Oct 2024

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Environmental DNA as a complementary tool for biodiversity monitoring: A multi-technique and multi-trophic approach to investigate cetacean distribution and feeding ecology

Luís Afonso, Joana Costa, Ana Mafalda Correia, Raul Valente, Eva Lopes, Maria Paola Tomasino, Ágatha Gil, Cláudia Oliveira-Rodrigues, Isabel Sousa Pino, Alfredo López, Paula Suarez-Bregua, Catarina Magalhães

published 16 Oct 2024

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Chromosomal gene order defines several structural classes of Staphylococcus epidermidis genomes

Naya Nagy, Paul Hodor

published 04 Oct 2024

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A new amino acid substitution in the MvALS1 gene of metsulfuron-methyl resistant biotypes Monochoria vaginalis (Burm. f.) C. Presl from West Java, Indonesia

Kansa Dianti Putri, Dwi Guntoro, Sintho Wahyuning Ardie, Hariyadi

published 04 Oct 2024

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Avidity sequencing of whole genomes from retinal degeneration pedigrees identifies causal variants

Pooja Biswas, Adda Villanueva, Benjamin J. Krajacich, Juan Moreno, Junhua Zhao, Anne Marie Berry, Danielle Lazaro, Bryan R. Lajoie, Semyon Kruglyak, Radha Ayyagari

published 04 Oct 2024

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Phage libraries screening on P53: Yield improvement by zinc and a new parasites-integrating analysis

Sihem Ben Abid, Emna Ketata, Ines Yacoubi, Lamia Djemal, Salma Abdelmoula-Souissi, Aida Koubaa, Raja Mokdad-Gargouri, Ali Gargouri

published 03 Oct 2024

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GenerRNA: A generative pre-trained language model for de novo RNA design

Yichong Zhao, Kenta Oono, Hiroki Takizawa, Masaaki Kotera

published 01 Oct 2024

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Comparing the effectiveness of environmental DNA and camera traps for surveying American mink (Neogale vison) in northeastern Indiana

Eleanor L. Di Girolamo, Mark A. Jordan, Geriann Albers, Scott M. Bergeson

published 23 Sep 2024

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Field and DNA-barcode based surveys reveal evidence of rare endemic fishes in the Rufiji River Basin

Jackson L. Saiperaki, Silvia F. Materu, Prisila A. Mkenda, Elly J. Ligate, Cyrus Rumisha

published 19 Sep 2024

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Graph-based analysis of DNA sequence comparison in closed cotton species: A generalized method to unveil genetic connections

Riaz Hussain Khan, Nadeem Salamat, A. Q. Baig, Zaffar Ahmed Shaikh, Amr Yousef

published 17 Sep 2024

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Unlocking epitope similarity: A comparative analysis of the American manatee (Trichechus manatus) IgA and human IgA through an immuno-informatics approach

Mariapaula Díaz-Yayguaje, Susana Caballero-Gaitan, Augusto Valderrama-Aguirre

published 16 Sep 2024

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Gene sequence analysis model construction based on k-mer statistics

Dongjie Gao

published 12 Sep 2024

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