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Sequence analysis

Transcriptome Analysis of a Petal Anthocyanin Polymorphism in the Arctic Mustard, Parrya nudicaulis

Timothy Butler, Cynthia Dick, Matthew L. Carlson, Justen B. Whittall

published 17 Jul 2014

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Development of a Multiplex Real-Time PCR for the Rapid Detection of the Predominant Beta-Lactamase Genes CTX-M, SHV, TEM and CIT-Type AmpCs in Enterobacteriaceae

Nicole Roschanski, Jennie Fischer, Beatriz Guerra, Uwe Roesler

published 17 Jul 2014

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Effective Automated Feature Construction and Selection for Classification of Biological Sequences

Uday Kamath, Kenneth De Jong, Amarda Shehu

published 17 Jul 2014

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Phylodynamic Analysis Reveals CRF01_AE Dissemination between Japan and Neighboring Asian Countries and the Role of Intravenous Drug Use in Transmission

Teiichiro Shiino, Junko Hattori, Yoshiyuki Yokomaku, Yasumasa Iwatani, Wataru Sugiura, Japanese Drug Resistance HIV-1 Surveillance Network

published 15 Jul 2014

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Quantifying the Effect of Ribosomal Density on mRNA Stability

Shlomit Edri, Tamir Tuller

published 14 Jul 2014

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Quickly Finding Orthologs as Reciprocal Best Hits with BLAT, LAST, and UBLAST: How Much Do We Miss?

Natalie Ward, Gabriel Moreno-Hagelsieb

published 11 Jul 2014

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Identification of a Major Phosphopeptide in Human Tristetraprolin by Phosphopeptide Mapping and Mass Spectrometry

Heping Cao, Leesa J. Deterding, Perry J. Blackshear

published 10 Jul 2014

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Feline Calicivirus Can Tolerate Gross Changes of Its Minor Capsid Protein Expression Levels Induced by Changing Translation Reinitiation Frequency or Use of a Separate VP2-Coding mRNA

Maria Haß, Christine Luttermann, Gregor Meyers

published 09 Jul 2014

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A Good Compromise: Rapid and Robust Species Proxies for Inventorying Biodiversity Hotspots Using the Terebridae (Gastropoda: Conoidea)

Maria Vittoria Modica, Nicolas Puillandre, Magalie Castelin, Yu Zhang, Mandë Holford

published 08 Jul 2014

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An Integrated SNP Mining and Utilization (ISMU) Pipeline for Next Generation Sequencing Data

Sarwar Azam, Abhishek Rathore, Trushar M. Shah, Mohan Telluri, BhanuPrakash Amindala, Pradeep Ruperao, Mohan A. V. S. K. Katta, Rajeev K. Varshney

published 08 Jul 2014

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Some Limitations of Public Sequence Data for Phylogenetic Inference (in Plants)

Cody E. Hinchliff, Stephen Andrew Smith

published 07 Jul 2014

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Single-Nucleotide Mutation Matrix: A New Model for Predicting the NF-κB DNA Binding Sites

Wenxin Du, Jing Gao, Tingting Wang, Jinke Wang

published 03 Jul 2014

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Assessment of the Impact of Using a Reference Transcriptome in Mapping Short RNA-Seq Reads

Shanrong Zhao

published 03 Jul 2014

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