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Sequence analysis

Design Pattern Mining Using Distributed Learning Automata and DNA Sequence Alignment

Mansour Esmaeilpour, Vahideh Naderifar, Zarina Shukur

published 22 Sep 2014

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Genome-Wide Identification and Expression Analysis of NBS-Encoding Genes in Malus x domestica and Expansion of NBS Genes Family in Rosaceae

Preeti Arya, Gulshan Kumar, Vishal Acharya, Anil K. Singh

published 18 Sep 2014

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A New Supervised Over-Sampling Algorithm with Application to Protein-Nucleotide Binding Residue Prediction

Jun Hu, Xue He, Dong-Jun Yu, Xi-Bei Yang, Jing-Yu Yang, Hong-Bin Shen

published 17 Sep 2014

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Recombination Drives Evolution of the Clostridium difficile 16S-23S rRNA Intergenic Spacer Region

Sandra Janezic, Alexander Indra, Thomas Rattei, Thomas Weinmaier, Maja Rupnik

published 15 Sep 2014

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Can Natural Proteins Designed with ‘Inverted’ Peptide Sequences Adopt Native-Like Protein Folds?

Settu Sridhar, Kunchur Guruprasad

published 11 Sep 2014

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Nitric Oxide Production by Necrotrophic Pathogen Macrophomina phaseolina and the Host Plant in Charcoal Rot Disease of Jute: Complexity of the Interplay between Necrotroph–Host Plant Interactions

Tuhin Subhra Sarkar, Pranjal Biswas, Subrata Kumar Ghosh, Sanjay Ghosh

published 10 Sep 2014

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Fast and Accurate Discovery of Degenerate Linear Motifs in Protein Sequences

Abdellali Kelil, Benjamin Dubreuil, Emmanuel D. Levy, Stephen W. Michnick

published 10 Sep 2014

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Recombination Pattern Reanalysis of Some HIV-1 Circulating Recombination Forms Suggest the Necessity and Difficulty of Revision

Lei Jia, Lin Li, Hanping Li, Siyang Liu, Xiaolin Wang, Zuoyi Bao, Tianyi Li, Daomin Zhuang, Yongjian Liu, Jingyun Li

published 09 Sep 2014

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Partition Enrichment of Nucleotide Sequences (PINS) - A Generally Applicable, Sequence Based Method for Enrichment of Complex DNA Samples

Thomas Kvist, Line Sondt-Marcussen, Marie Just Mikkelsen

published 09 Sep 2014

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Statistical Approach of Functional Profiling for a Microbial Community

Lingling An, Nauromal Pookhao, Hongmei Jiang, Jiannong Xu

published 08 Sep 2014

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Genome-Wide Binding and Transcriptome Analysis of Human Farnesoid X Receptor in Primary Human Hepatocytes

Le Zhan, Hui-Xin Liu, Yaping Fang, Bo Kong, Yuqi He, Xiao-bo Zhong, Jianwen Fang, Yu-Jui Yvonne Wan, Grace L. Guo

published 08 Sep 2014

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Development of New Multilocus Variable Number of Tandem Repeat Analysis (MLVA) for Listeria innocua and Its Application in a Food Processing Plant

Hajime Takahashi, Chihiro Ohshima, Miku Nakagawa, Krittaporn Thanatsang, Chirapiphat Phraephaisarn, Yuphakhun Chaturongkasumrit, Suwimon Keeratipibul, Takashi Kuda, Bon Kimura

published 08 Sep 2014

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An Expanded Combined Evidence Approach to the Gavialis Problem Using Geometric Morphometric Data from Crocodylian Braincases and Eustachian Systems

Maria Eugenia Leone Gold, Christopher A. Brochu, Mark A. Norell

published 08 Sep 2014

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