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Sequence analysis

Bayesian Model of Protein Primary Sequence for Secondary Structure Prediction

Qiwei Li, David B. Dahl, Marina Vannucci, Hyun Joo, Jerry W. Tsai

published 14 Oct 2014

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Covariance of Charged Amino Acids at Positions 322 and 440 of HIV-1 Env Contributes to Coreceptor Specificity of Subtype B Viruses, and Can Be Used to Improve the Performance of V3 Sequence-Based Coreceptor Usage Prediction Algorithms

Kieran Cashin, Jasminka Sterjovski, Katherine L. Harvey, Paul A. Ramsland, Melissa J. Churchill, Paul R. Gorry

published 14 Oct 2014

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Identification of a Novel Nucleocytoplasmic Shuttling RNA Helicase of Trypanosomes

Alexandre Haruo Inoue, Mariana Serpeloni, Priscila Mazzocchi Hiraiwa, Sueli Fumie Yamada-Ogatta, João Renato Carvalho Muniz, Maria Cristina Machado Motta, Newton Medeiros Vidal, Samuel Goldenberg, Andréa Rodrigues Ávila

published 14 Oct 2014

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Two Structural Motifs within Canonical EF-Hand Calcium-Binding Domains Identify Five Different Classes of Calcium Buffers and Sensors

Konstantin Denessiouk, Sergei Permyakov, Alexander Denesyuk, Eugene Permyakov, Mark S. Johnson

published 14 Oct 2014

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Computational and Experimental Characterization of dVHL Establish a Drosophila Model of VHL Syndrome

Merav D. Shmueli, Lee Schnaider, Gal Herzog, Ehud Gazit, Daniel Segal

published 13 Oct 2014

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Reliable In Silico Identification of Sequence Polymorphisms and Their Application for Extending the Genetic Map of Sugar Beet (Beta vulgaris)

Daniela Holtgräwe, Thomas Rosleff Sörensen, Prisca Viehöver, Jessica Schneider, Britta Schulz, Dietrich Borchardt, Thomas Kraft, Heinz Himmelbauer, Bernd Weisshaar

published 10 Oct 2014

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Transcriptome Analysis of the Trachinotus ovatus: Identification of Reproduction, Growth and Immune-Related Genes and Microsatellite Markers

Xie Zhenzhen, Xiao Ling, Wang Dengdong, Fang Chao, Liu Qiongyu, Li Zihao, Liu Xiaochun, Zhang Yong, Li Shuisheng, Lin Haoran

published 10 Oct 2014

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Intragenic Recombination Has a Critical Role on the Evolution of Legionella pneumophila Virulence-Related Effector sidJ

Joana Costa, Paulo Gonçalves Teixeira, Ana Filipa d'Avó, Célio Santos Júnior, António Veríssimo

published 09 Oct 2014

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A DNA Barcoding Approach to Characterize Pollen Collected by Honeybees

Andrea Galimberti, Fabrizio De Mattia, Ilaria Bruni, Daniela Scaccabarozzi, Anna Sandionigi, Michela Barbuto, Maurizio Casiraghi, Massimo Labra

published 08 Oct 2014

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Adhesive Proteins of Stalked and Acorn Barnacles Display Homology with Low Sequence Similarities

Jaimie-Leigh Jonker, Florence Abram, Elisabete Pires, Ana Varela Coelho, Ingo Grunwald, Anne Marie Power

published 08 Oct 2014

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Genome-Wide Identification and Tissue-Specific Expression Analysis of UDP-Glycosyltransferases Genes Confirm Their Abundance in Cicer arietinum (Chickpea) Genome

Ranu Sharma, Vimal Rawat, C. G. Suresh

published 07 Oct 2014

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Indexes of Large Genome Collections on a PC

Agnieszka Danek, Sebastian Deorowicz, Szymon Grabowski

published 07 Oct 2014

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Novel Respiratory Syncytial Virus (RSV) Genotype ON1 Predominates in Germany during Winter Season 2012–13

Julia Tabatabai, Christiane Prifert, Johannes Pfeil, Jürgen Grulich-Henn, Paul Schnitzler

published 07 Oct 2014

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