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Sequence analysis

Phylogenetic Properties of 50 Nuclear Loci in Medicago (Leguminosae) Generated Using Multiplexed Sequence Capture and Next-Generation Sequencing

Filipe de Sousa, Yann J. K. Bertrand, [ ... ], Bernard E. Pfeil

Inspection of the Grapevine BURP Superfamily Highlights an Expansion of RD22 Genes with Distinctive Expression Features in Berry Development and ABA-Mediated Stress Responses

José Tomás Matus, Felipe Aquea, [ ... ], Patricio Arce-Johnson

Whole Genome Complete Resequencing of Bacillus subtilis Natto by Combining Long Reads with High-Quality Short Reads

Mayumi Kamada, Sumitaka Hase, [ ... ], Yasubumi Sakakibara

Integrated Analysis of Microarray Data of Atherosclerotic Plaques: Modulation of the Ubiquitin-Proteasome System

Zhe Wang, Dong Guo, [ ... ], Qunye Zhang

Protein Interactions of the Vesicular Glutamate Transporter VGLUT1

Magda S. Santos, Sarah M. Foss, C. Kevin Park, Susan M. Voglmaier

Bayesian Model of Protein Primary Sequence for Secondary Structure Prediction

Qiwei Li, David B. Dahl, [ ... ], Jerry W. Tsai

Covariance of Charged Amino Acids at Positions 322 and 440 of HIV-1 Env Contributes to Coreceptor Specificity of Subtype B Viruses, and Can Be Used to Improve the Performance of V3 Sequence-Based Coreceptor Usage Prediction Algorithms

Kieran Cashin, Jasminka Sterjovski, [ ... ], Paul R. Gorry

Identification of a Novel Nucleocytoplasmic Shuttling RNA Helicase of Trypanosomes

Alexandre Haruo Inoue, Mariana Serpeloni, [ ... ], Andréa Rodrigues Ávila

Two Structural Motifs within Canonical EF-Hand Calcium-Binding Domains Identify Five Different Classes of Calcium Buffers and Sensors

Konstantin Denessiouk, Sergei Permyakov, [ ... ], Mark S. Johnson

Computational and Experimental Characterization of dVHL Establish a Drosophila Model of VHL Syndrome

Merav D. Shmueli, Lee Schnaider, [ ... ], Daniel Segal

Reliable In Silico Identification of Sequence Polymorphisms and Their Application for Extending the Genetic Map of Sugar Beet (Beta vulgaris)

Daniela Holtgräwe, Thomas Rosleff Sörensen, [ ... ], Bernd Weisshaar

Transcriptome Analysis of the Trachinotus ovatus: Identification of Reproduction, Growth and Immune-Related Genes and Microsatellite Markers

Xie Zhenzhen, Xiao Ling, [ ... ], Lin Haoran

Intragenic Recombination Has a Critical Role on the Evolution of Legionella pneumophila Virulence-Related Effector sidJ

Joana Costa, Paulo Gonçalves Teixeira, [ ... ], António Veríssimo

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