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Sequence analysis

DNA Barcode Analysis of Thrips (Thysanoptera) Diversity in Pakistan Reveals Cryptic Species Complexes

Romana Iftikhar, Muhammad Ashfaq, Akhtar Rasool, Paul D. N. Hebert

published 07 Jan 2016

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Comparing Residue Clusters from Thermophilic and Mesophilic Enzymes Reveals Adaptive Mechanisms

Deanne W. Sammond, Noah Kastelowitz, Michael E. Himmel, Hang Yin, Michael F. Crowley, Yannick J. Bomble

published 07 Jan 2016

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Estimation of a Killer Whale (Orcinus orca) Population’s Diet Using Sequencing Analysis of DNA from Feces

Michael J. Ford, Jennifer Hempelmann, M. Bradley Hanson, Katherine L. Ayres, Robin W. Baird, Candice K. Emmons, Jessica I. Lundin, Gregory S. Schorr, Samuel K. Wasser, Linda K. Park

published 06 Jan 2016

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SeqFeatR for the Discovery of Feature-Sequence Associations

Bettina Budeus, Jörg Timm, Daniel Hoffmann

published 05 Jan 2016

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Decoding Biomass-Sensing Regulons of Clostridium thermocellum Alternative Sigma-I Factors in a Heterologous Bacillus subtilis Host System

Iván Muñoz-Gutiérrez, Lizett Ortiz de Ora, Inna Rozman Grinberg, Yuval Garty, Edward A. Bayer, Yuval Shoham, Raphael Lamed, Ilya Borovok

published 05 Jan 2016

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Selecting Superior De Novo Transcriptome Assemblies: Lessons Learned by Leveraging the Best Plant Genome

Loren A. Honaas, Eric K. Wafula, Norman J. Wickett, Joshua P. Der, Yeting Zhang, Patrick P. Edger, Naomi S. Altman, J. Chris Pires, James H. Leebens-Mack, Claude W. dePamphilis

published 05 Jan 2016

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“Candidatus Fokinia solitaria”, a Novel “Stand-Alone” Symbiotic Lineage of Midichloriaceae (Rickettsiales)

Franziska Szokoli, Elena Sabaneyeva, Michele Castelli, Sascha Krenek, Martina Schrallhammer, Carlos A. G. Soares, Inacio D. da Silva-Neto, Thomas U. Berendonk, Giulio Petroni

published 05 Jan 2016

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Parallel and Scalable Short-Read Alignment on Multi-Core Clusters Using UPC++

Jorge González-Domínguez, Yongchao Liu, Bertil Schmidt

published 05 Jan 2016

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Ribosomal DNA and Plastid Markers Used to Sample Fungal and Plant Communities from Wetland Soils Reveals Complementary Biotas

Teresita M. Porter, Shadi Shokralla, Donald Baird, G. Brian Golding, Mehrdad Hajibabaei

published 05 Jan 2016

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Characterization and Expression of the Zebrafish qki Paralogs

Katarzyna J. Radomska, Jonathan Sager, Bryn Farnsworth, Åsa Tellgren-Roth, Giulia Tuveri, Christiane Peuckert, Petronella Kettunen, Elena Jazin, Lina S. Emilsson

published 04 Jan 2016

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Characterization of Oyster Voltage-Dependent Anion Channel 2 (VDAC2) Suggests Its Involvement in Apoptosis and Host Defense

Yingxiang Li, Linlin Zhang, Tao Qu, Li Li, Guofan Zhang

published 04 Jan 2016

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SW#db: GPU-Accelerated Exact Sequence Similarity Database Search

Matija Korpar, Martin Šošić, Dino Blažeka, Mile Šikić

published 31 Dec 2015

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Identification of a Flavivirus Sequence in a Marine Arthropod

Michael J. Conway

published 30 Dec 2015

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