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Sequence analysis

EcoBLMcrX, a classical modification-dependent restriction enzyme in Escherichia coli B: Characterization in vivo and in vitro with a new approach to cleavage site determination

Alexey Fomenkov, Zhiyi Sun, [ ... ], Elisabeth A. Raleigh

PpTFDB: A pigeonpea transcription factor database for exploring functional genomics in legumes

Akshay Singh, Ajay Kumar Sharma, Nagendra Kumar Singh, Tilak Raj Sharma

Evolution of microRNA in primates

Jey C. McCreight, Sean E. Schneider, Damien B. Wilburn, Willie J. Swanson

IpiRId: Integrative approach for piRNA prediction using genomic and epigenomic data

Anouar Boucheham, Vivien Sommard, [ ... ], Fariza Tahi

Characterization of the regulation of a plant polysaccharide utilization operon and its role in biofilm formation in Bacillus subtilis

Cameron Habib, Yiyang Yu, [ ... ], Yunrong Chai

A TALE-inspired computational screen for proteins that contain approximate tandem repeats

Malgorzata Perycz, Joanna Krwawicz, Matthias Bochtler

Time-calibrated molecular phylogeny of pteropods

Alice K. Burridge, Christine Hörnlein, [ ... ], Katja T. C. A. Peijnenburg

Application of environmental DNA to detect an endangered marine skate species in the wild

Kay Weltz, Jeremy M. Lyle, [ ... ], Jayson M. Semmens

More than one fungus in the pepper pot: Integrative taxonomy unmasks hidden species within Myriostoma coliforme (Geastraceae, Basidiomycota)

Julieth O. Sousa, Laura M. Suz, [ ... ], María P. Martín

Genome-wide analysis of DWD proteins in soybean (Glycine max): Significance of Gm08DWD and GmMYB176 interaction in isoflavonoid biosynthesis

Shaomin Bian, Xuyan Li, [ ... ], Sangeeta Dhaubhadel

DeepNano: Deep recurrent neural networks for base calling in MinION nanopore reads

Vladimír Boža, Broňa Brejová, Tomáš Vinař

Development of microsatellite markers and assembly of the plastid genome in Cistanthe longiscapa (Montiaceae) based on low-coverage whole genome sequencing

Alexandra Stoll, Dörte Harpke, [ ... ], Dietmar Quandt

SeqEnrich: A tool to predict transcription factor networks from co-expressed Arabidopsis and Brassica napus gene sets

Michael G. Becker, Philip L. Walker, Nadège C. Pulgar-Vidal, Mark F. Belmonte

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