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Sequence analysis

The distinct plastid genome structure of Maackia fauriei (Fabaceae: Papilionoideae) and its systematic implications for genistoids and tribe Sophoreae

In-Su Choi, Byoung-Hee Choi

Comparative transcriptomics of Entelegyne spiders (Araneae, Entelegynae), with emphasis on molecular evolution of orphan genes

David E. Carlson, Marshal Hedin

The genetic evolution of canine parvovirus – A new perspective

Pei Zhou, Weijie Zeng, Xin Zhang, Shoujun Li

Chemical property based sequence characterization of PpcA and its homolog proteins PpcB-E: A mathematical approach

Jayanta Kumar Das, Pabitra Pal Choudhury

Halvade-RNA: Parallel variant calling from transcriptomic data using MapReduce

Dries Decap, Joke Reumers, [ ... ], Jan Fostier

MIPE: A metagenome-based community structure explorer and SSU primer evaluation tool

Bin Zou, JieFu Li, Quan Zhou, Zhe-Xue Quan

ML2Motif—Reliable extraction of discriminative sequence motifs from learning machines

Marina M. -C. Vidovic, Marius Kloft, Klaus-Robert Müller, Nico Görnitz

A genome-wide identification and analysis of the DYW-deaminase genes in the pentatricopeptide repeat gene family in cotton (Gossypium spp.)

Bingbing Zhang, Guoyuan Liu, [ ... ], Jianyong Wu

Evaluating alignment and variant-calling software for mutation identification in C. elegans by whole-genome sequencing

Harold E. Smith, Sijung Yun

Discriminating between HuR and TTP binding sites using the k-spectrum kernel method

Shweta Bhandare, Debra S. Goldberg, Robin Dowell

The mouse genome displays highly dynamic populations of KRAB-zinc finger protein genes and related genetic units

Annamaria Kauzlaric, Gabriela Ecco, [ ... ], Didier Trono

Improving transcriptome de novo assembly by using a reference genome of a related species: Translational genomics from oil palm to coconut

Alix Armero, Luc Baudouin, Stéphanie Bocs, Dominique This

IsoSel: Protein Isoform Selector for phylogenetic reconstructions

Héloïse Philippon, Alexia Souvane, Céline Brochier-Armanet, Guy Perrière

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