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Sequence analysis

Membrane protein contact and structure prediction using co-evolution in conjunction with machine learning

Pedro L. Teixeira, Jeff L. Mendenhall, Sten Heinze, Brian Weiner, Marcin J. Skwark, Jens Meiler

published 24 May 2017

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In silico development and characterization of tri-nucleotide simple sequence repeat markers in hazelnut (Corylus avellana L.)

Gehendra Bhattarai, Shawn A. Mehlenbacher

published 22 May 2017

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A technique for setting analytical thresholds in massively parallel sequencing-based forensic DNA analysis

Brian Young, Jonathan L. King, Bruce Budowle, Luigi Armogida

published 18 May 2017

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Environmental DNA (eDNA) metabarcoding assays to detect invasive invertebrate species in the Great Lakes

Katy E. Klymus, Nathaniel T. Marshall, Carol A. Stepien

published 18 May 2017

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CorNet: Assigning function to networks of co-evolving residues by automated literature mining

Tom van den Bergh, Giorgio Tamo, Alberto Nobili, Yifeng Tao, Tianwei Tan, Uwe T. Bornscheuer, Remko K. P. Kuipers, Bas Vroling, René M. de Jong, Kalyanasundaram Subramanian, Peter J. Schaap, Tom Desmet, Bernd Nidetzky, Gert Vriend, Henk-Jan Joosten

published 18 May 2017

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Identification of human short introns

Emmanuel L. Abebrese, Syed H. Ali, Zachary R. Arnold, Victoria M. Andrews, Katharine Armstrong, Lindsay Burns, Hannah R. Crowder, R. Thomas Day Jr., Daniel G. Hsu, Katherine Jarrell, Grace Lee, Yi Luo, Daphine Mugayo, Zain Raza, Kyle Friend

published 17 May 2017

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Transcriptomic analysis of salt stress responsive genes in Rhazya stricta

Nahid H. Hajrah, Abdullah Y. Obaid, Ahmed Atef, Ahmed M. Ramadan, Dhivya Arasappan, Charllotte A. Nelson, Sherif Edris, Mohammed Z. Mutwakil, Alawia Alhebshi, Nour O. Gadalla, Rania M. Makki, Madgy A. Al-Kordy, Fotouh M. El-Domyati, Jamal S. M. Sabir, Mohammad A. Khiyami, Neil Hall, Ahmed Bahieldin, Robert K. Jansen

published 16 May 2017

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Structural adaptations of octaheme nitrite reductases from haloalkaliphilic Thioalkalivibrio bacteria to alkaline pH and high salinity

Anna Popinako, Mikhail Antonov, Alexey Tikhonov, Tamara Tikhonova, Vladimir Popov

published 16 May 2017

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Changes in gene expression between a soybean F₁ hybrid and its parents are associated with agronomically valuable traits

Earl Taliercio, David Eickholt, Rakin Rouf, Thomas Carter

published 11 May 2017

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Acetyl group coordinated progression through the catalytic cycle of an arylalkylamine N-acetyltransferase

Adam A. Aboalroub, Ashleigh B. Bachman, Ziming Zhang, Dimitra Keramisanou, David J. Merkler, Ioannis Gelis

published 09 May 2017

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Age, gender and UV-exposition related effects on gene expression in in vivo aged short term cultivated human dermal fibroblasts

Wolfgang Kaisers, Petra Boukamp, Hans-Jürgen Stark, Holger Schwender, Julia Tigges, Jean Krutmann, Heiner Schaal

published 05 May 2017

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Fluoride export (FEX) proteins from fungi, plants and animals are 'single barreled' channels containing one functional and one vestigial ion pore

Tetyana Berbasova, Sunitha Nallur, Taylor Sells, Kathryn D. Smith, Patricia B. Gordon, Susan Lori Tausta, Scott A. Strobel

published 04 May 2017

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Molecular identification of transmembrane protein 68 as an endoplasmic reticulum-anchored and brain-specific protein

Ping’an Chang, Christoph Heier, Wenzhen Qin, Liping Han, Feifei Huang, Quan Sun

published 04 May 2017

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