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Sequence analysis

Genome-wide analysis of DWD proteins in soybean (Glycine max): Significance of Gm08DWD and GmMYB176 interaction in isoflavonoid biosynthesis

Shaomin Bian, Xuyan Li, [ ... ], Sangeeta Dhaubhadel

DeepNano: Deep recurrent neural networks for base calling in MinION nanopore reads

Vladimír Boža, Broňa Brejová, Tomáš Vinař

Development of microsatellite markers and assembly of the plastid genome in Cistanthe longiscapa (Montiaceae) based on low-coverage whole genome sequencing

Alexandra Stoll, Dörte Harpke, [ ... ], Dietmar Quandt

SeqEnrich: A tool to predict transcription factor networks from co-expressed Arabidopsis and Brassica napus gene sets

Michael G. Becker, Philip L. Walker, Nadège C. Pulgar-Vidal, Mark F. Belmonte

Automated high throughput nucleic acid purification from formalin-fixed paraffin-embedded tissue samples for next generation sequence analysis

Simon Haile, Pawan Pandoh, [ ... ], Marco A. Marra

Identification of TIFY/JAZ family genes in Solanum lycopersicum and their regulation in response to abiotic stresses

Andrea Chini, Walid Ben-Romdhane, Afif Hassairi, Mourad A. M. Aboul-Soud

Rapid detection and strain typing of Chlamydia trachomatis using a highly multiplexed microfluidic PCR assay

Rosemary S. Turingan, Ludmila Kaplun, [ ... ], Richard F. Selden

A quantitative indicator diagram for lytic polysaccharide monooxygenases reveals the role of aromatic surface residues in HjLPMO9A regioselectivity

Barbara Danneels, Magali Tanghe, [ ... ], Tom Desmet

Evaluation of three molecular markers for identification of European primary parasitoids of cereal aphids and their hyperparasitoids

Zhengpei Ye, Ines M. G. Vollhardt, Zeljko Tomanovic, Michael Traugott

Sequence statistics of tertiary structural motifs reflect protein stability

Fan Zheng, Gevorg Grigoryan

Genome-wide survey of B-box proteins in potato (Solanum tuberosum)—Identification, characterization and expression patterns during diurnal cycle, etiolation and de-etiolation

Urszula Talar, Agnieszka Kiełbowicz-Matuk, Jagoda Czarnecka, Tadeusz Rorat

Validating regulatory predictions from diverse bacteria with mutant fitness data

Shiori Sagawa, Morgan N. Price, Adam M. Deutschbauer, Adam P. Arkin

DNA barcoding and LC-MS metabolite profiling of the lichen-forming genus Melanelia: Specimen identification and discrimination focusing on Icelandic taxa

Maonian Xu, Starri Heidmarsson, [ ... ], Elin S. Olafsdottir

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