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Sequence analysis

Genome-wide identification and characterization of cacao WRKY transcription factors and analysis of their expression in response to witches' broom disease

Dayanne Silva Monteiro de Almeida, Daniel Oliveira Jordão do Amaral, Luiz-Eduardo Del-Bem, Emily Bronze dos Santos, Raner José Santana Silva, Karina Peres Gramacho, Michel Vincentz, Fabienne Micheli

published 30 Oct 2017

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Prevalence, risk factors, and virulence genes of Helicobacter pylori among dyspeptic patients in two different gastric cancer risk regions of Thailand

Phawinee Subsomwong, Muhammad Miftahussurur, Tomohisa Uchida, Ratha-korn Vilaichone, Thawee Ratanachu-ek, Varocha Mahachai, Yoshio Yamaoka

published 30 Oct 2017

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Pea Marker Database (PMD) – A new online database combining known pea (Pisum sativum L.) gene-based markers

Olga A. Kulaeva, Aleksandr I. Zhernakov, Alexey M. Afonin, Sergei S. Boikov, Anton S. Sulima, Igor A. Tikhonovich, Vladimir A. Zhukov

published 26 Oct 2017

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BBMerge – Accurate paired shotgun read merging via overlap

Brian Bushnell, Jonathan Rood, Esther Singer

published 26 Oct 2017

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A deep transcriptomic resource for the copepod crustacean Labidocera madurae: A potential indicator species for assessing near shore ecosystem health

Vittoria Roncalli, Andrew E. Christie, Stephanie A. Sommer, Matthew C. Cieslak, Daniel K. Hartline, Petra H. Lenz

published 24 Oct 2017

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De novo RNA sequencing transcriptome of Rhododendron obtusum identified the early heat response genes involved in the transcriptional regulation of photosynthesis

Linchuan Fang, Jun Tong, Yanfang Dong, Dongyun Xu, Jing Mao, Yuan Zhou

published 23 Oct 2017

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Decrypting the Polyporus dictyopus complex: Recovery of Atroporus Ryvarden and segregation of Neodictyopus gen. nov. (Polyporales, Basidiomyocta)

Melissa Palacio, Gerardo Lucio Robledo, Mateus Arduvino Reck, Emanuel Grassi, Aristóteles Góes-Neto, Elisandro Ricardo Drechsler-Santos

published 19 Oct 2017

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Impact of annotation error in α-globin genes on molecular diagnosis

J. Francis Borgio

published 19 Oct 2017

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Immune-modulatory genomic properties differentiate gut microbiota of infants with and without eczema

Seungdae Oh, Gaik Chin Yap, Pei-Ying Hong, Chiung-Hui Huang, Marion M. Aw, Lynette Pei-Chi Shek, Wen-Tso Liu, Bee Wah Lee

published 19 Oct 2017

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Analysis of peripheral B cells and autoantibodies against the anti-nicotinic acetylcholine receptor derived from patients with myasthenia gravis using single-cell manipulation tools

Tomohiro Makino, Ryuichi Nakamura, Maki Terakawa, Satoshi Muneoka, Kazuhiro Nagahira, Yuriko Nagane, Jyoji Yamate, Masakatsu Motomura, Kimiaki Utsugisawa

published 17 Oct 2017

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Structural plasticity of the N-terminal capping helix of the TPR domain of kinesin light chain

The Quyen Nguyen, Mélanie Chenon, Fernando Vilela, Christophe Velours, Magali Aumont-Nicaise, Jessica Andreani, Paloma F. Varela, Paola Llinas, Julie Ménétrey

published 16 Oct 2017

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Identification of cis-regulatory sequences reveals potential participation of lola and Deaf1 transcription factors in Anopheles gambiae innate immune response

Bernardo Pérez-Zamorano, Sandra Rosas-Madrigal, Oscar Arturo Migueles Lozano, Manuel Castillo Méndez, Verónica Valverde-Garduño

published 13 Oct 2017

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Diversity and microevolution of CRISPR loci in Helicobacter cinaedi

Junko Tomida, Yuji Morita, Keigo Shibayama, Ken Kikuchi, Tomohiro Sawa, Takaaki Akaike, Yoshiaki Kawamura

published 13 Oct 2017

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