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Riboswitches

Inhibition of xpt Guanine Riboswitch by a synthetic nucleoside analog

Swapan S. Jain, Emily C. McLaughlin, [ ... ], Korrapati Narasimhulu

Identification of potential riboswitch elements in Homo sapiens mRNA 5’UTR sequences using positive-unlabeled machine learning

William S Raymond, Jacob DeRoo, Brian Munsky

Antisense-acting riboswitches: A poorly characterized yet important model of transcriptional regulation in prokaryotic organisms

Mariela Serrano-Gutiérrez, Enrique Merino

Translational gene expression control in Chlamydia trachomatis

Nicole A. Grieshaber, Travis J. Chiarelli, [ ... ], Scott S. Grieshaber

Requirements for efficient ligand-gated co-transcriptional switching in designed variants of the B. subtilis pbuE adenine-responsive riboswitch in E. coli

Lea K. Drogalis, Robert T. Batey

Modeling a synthetic aptamer-based riboswitch biosensor sensitive to low hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) concentrations

Michael L. Mayo, Jed O. Eberly, Fiona H. Crocker, Karl J. Indest

Identification and characterisation of thiamine pyrophosphate (TPP) riboswitch in Elaeis guineensis

Atiqah Subki, Chai Ling Ho, [ ... ], Zetty Norhana Balia Yusof

Structural prediction of RNA switches using conditional base-pair probabilities

Amirhossein Manzourolajdad, John L. Spouge

Extracting information from RNA SHAPE data: Kalman filtering approach

Sana Vaziri, Patrice Koehl, Sharon Aviran

RiboFACSeq: A new method for investigating metabolic and transport pathways in bacterial cells by combining a riboswitch-based sensor, fluorescence-activated cell sorting and next-generation sequencing

Zohaib Ghazi, Shahrzad Jahanshahi, Yingfu Li

Comparative genomics and phylogenomic analyses of lysine riboswitch distributions in bacteria

Sumit Mukherjee, Danny Barash, Supratim Sengupta

Ligand-mediated and tertiary interactions cooperatively stabilize the P1 region in the guanine-sensing riboswitch

Christian A. Hanke, Holger Gohlke

The Conserved Dcw Gene Cluster of R. sphaeroides Is Preceded by an Uncommonly Extended 5’ Leader Featuring the sRNA UpsM

Lennart Weber, Clemens Thoelken, [ ... ], Gabriele Klug

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